DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5890 and Rcvrn

DIOPT Version :10

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_033064.1 Gene:Rcvrn / 19674 MGIID:97883 Length:202 Species:Mus musculus


Alignment Length:176 Identity:59/176 - (33%)
Similarity:103/176 - (58%) Gaps:6/176 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LEDLCRQTKFTKQEIRVMYRGFKTECPEGVVHEDCFKDIYAKFFPHGNSSLYAHYVFKAFDVNCN 93
            ||:|...||||::|:...|:.|..|||.|.:....|:.||:||||..:...||.:||::||.|.:
Mouse    14 LEELQLNTKFTEEELSAWYQSFLKECPSGRITRQEFESIYSKFFPDSDPKAYAQHVFRSFDANSD 78

  Fly    94 GAISFRDLLVTLSTLLRGSVYERLRWTFKLYDLNGDGRISRGELSEIILAIHELMGRRPHQ---- 154
            |.:.|::.::.|.....|...::|.|.|.|||::|:|.||:.|:.||::||.:::  :|..    
Mouse    79 GTLDFKEYVIALHMTTAGKPTQKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMI--KPEDVKLL 141

  Fly   155 PEDDRKARDQVDRVFRKLDLNQDGIITIEEFLEACLKDDLVTRSLQ 200
            |:|:.....:.::::......:|..:|.|||:|..|.:..:.|.:|
Mouse   142 PDDENTPEKRAEKIWAFFGKKEDDKLTEEEFIEGTLANKEILRLIQ 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 <80..188 CDD:444056 34/111 (31%)
RcvrnNP_033064.1 FRQ1 41..175 CDD:444056 42/135 (31%)
Interaction with GRK1. /evidence=ECO:0000250|UniProtKB:P21457 189..192
Blue background indicates that the domain is not in the aligned region.

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