Protein Alignment CG5890 and pbo-1

DIOPT Version :10

• Sequence 1: NP_001356889.1
• Gene: CG5890 / 43126
• FlyBaseID: FBgn0039380
• Length: 229
• Species: Drosophila melanogaster
• Sequence 2: NP_497601.1
• Gene: pbo-1 / 175385
• WormBaseID: WBGene00003941
• Length: 196
• Species: Caenorhabditis elegans
• Alignment Length: 183
• Identity: 34/183 - (18%)
• Similarity: 74/183 - (40%)
• Gaps: 52/183 - (28%)

  Fly    83 IPTENRNPHIKQMARNHDATPTKLVAHNYENRKMVKHLTDKHDDEVR------RKKMIIEAHQTN 141
            :|.:.|:|.:.......:...:.|:.:..|..|:.|  |.::...:|      :..::|::
 Worm    47 VPKKIRSPWLMLFPEGDNEDGSVLLFNPEEEEKIYK--TKRYFSGIRFLANSGKWFLLIDS---- 105

  Fly   142 MEEKKFKKNMIPMSEKKTIDLI----RRIEKEPS------IW-DKK---------------HEGY 180
                .|...:|.:..:..|||:    ..::||.|      :| |:|               :.|:
 Worm   106 ----LFNLYIIDVFSENKIDLLPLEESLLDKEESEDLTGLLWVDEKTAEYVVVLFFNFPSGNVGF 166

  Fly   181 RSKANKDKAWSRVVGKTGIPLEIVKAKWSSVLGSFRHYKALHLKDRGTRISYI 233
            ..|.  |..::::....|:|..: :....:||..:|    |:::   |.:|||
 Worm   167 CKKG--DDHYTKIPLHCGVPWRL-QGLIDAVLLGYR----LYIR---TELSYI 209

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5890	NP_001356889.1	FRQ1	<80..188	CDD:444056	23/136 (17%)
pbo-1	NP_497601.1	FRQ1	49..183	CDD:444056	23/145 (16%)
		EFh	115..181	CDD:238008	12/67 (18%)