Protein Alignment CG5890 and ncs-2

DIOPT Version :10

• Sequence 1: NP_001356889.1
• Gene: CG5890 / 43126
• FlyBaseID: FBgn0039380
• Length: 229
• Species: Drosophila melanogaster
• Sequence 2: NP_001366858.1
• Gene: ncs-2 / 172866
• WormBaseID: WBGene00003564
• Length: 190
• Species: Caenorhabditis elegans
• Alignment Length: 171
• Identity: 59/171 - (34%)
• Similarity: 106/171 - (61%)
• Gaps: 1/171 - (0%)

  Fly    22 PKPIPVALEDLCRQTKFTKQEIRVMYRGFKTECPEGVVHEDCFKDIYAKFFPHGNSSLYAHYVFK 86
            ||.....||.|.:.|.||:::|:..|:||..:||:|.:.::.|..:|..|||.|::..:..:||:
 Worm     8 PKLSKEDLEFLKKNTNFTEEQIKEWYKGFVQDCPKGHLTKEQFIKVYKDFFPSGSAEGFCEHVFR 72

  Fly    87 AFDVNCNGAISFRDLLVTLSTLLRGSVYERLRWTFKLYDLNGDGRISRGELSEIILAIHELMGRR 151
            .||.:.:|.|.|::.|:.::....|:..::|.|.|::||::|:|.|...|:.:||.||:|::|..
 Worm    73 TFDTDNSGFIDFKEFLLAINVTSSGTPEQKLEWAFRMYDIDGNGTIDEKEMIKIIEAIYEMLGPE 137

  Fly   152 PHQPEDDRKARDQVDRVFRKLDLNQDGIITIEEFLEACLKD 192
            ..:..|| ..|.:...:|.|:|:|.|..:|::||::.||.|
 Worm   138 VTKSADD-SPRKRAKMIFEKMDVNNDKELTLKEFVDGCLAD 177

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5890	NP_001356889.1	FRQ1	<80..188	CDD:444056	35/107 (33%)
ncs-2	NP_001366858.1	FRQ1	24..173	CDD:444056	50/149 (34%)
		EFh	67..127	CDD:238008	18/59 (31%)