DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5890 and kcnip2

DIOPT Version :10

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:XP_031761874.1 Gene:kcnip2 / 100494608 XenbaseID:XB-GENE-988846 Length:252 Species:Xenopus tropicalis


Alignment Length:179 Identity:88/179 - (49%)
Similarity:136/179 - (75%) Gaps:0/179 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PVALEDLCRQTKFTKQEIRVMYRGFKTECPEGVVHEDCFKDIYAKFFPHGNSSLYAHYVFKAFDV 90
            |..||.|..||||||:|::|:|||||.|||.|:|:|:.||.||::|||.|:||:|||::|.|||.
 Frog    72 PEGLEQLQEQTKFTKKELQVLYRGFKNECPSGIVNEENFKQIYSQFFPQGDSSMYAHFLFNAFDT 136

  Fly    91 NCNGAISFRDLLVTLSTLLRGSVYERLRWTFKLYDLNGDGRISRGELSEIILAIHELMGRRPHQP 155
            :.:|::||.|.:..||.:|||::.::|.|.|.|||||.||.|::.|:.:|:.:|:::||:..:..
 Frog   137 DHSGSVSFEDFVAGLSVILRGTIDDKLNWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPN 201

  Fly   156 EDDRKARDQVDRVFRKLDLNQDGIITIEEFLEACLKDDLVTRSLQMFDN 204
            ..:...|:.|:..|:|:|.|:||::|||||:|:|.||:.:.||:|:|||
 Frog   202 MREEAPREHVENFFQKMDRNKDGVVTIEEFIESCQKDENIMRSMQLFDN 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 <80..188 CDD:444056 45/107 (42%)
kcnip2XP_031761874.1 EFh 101..151 CDD:415501 25/49 (51%)
FRQ1 <130..237 CDD:444056 44/106 (42%)

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