DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5890 and klhl17

DIOPT Version :10

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:XP_004916201.1 Gene:klhl17 / 100491332 XenbaseID:XB-GENE-977875 Length:627 Species:Xenopus tropicalis


Alignment Length:156 Identity:36/156 - (23%)
Similarity:55/156 - (35%) Gaps:46/156 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PVALEDLCRQTKFTKQEIRVMYRGFKTECPEGV------VHEDCFKDIYAKFFPHGNSSLYAHYV 84
            |.|||.|. |..:| .||.|.....:|..|...      |.:.|.|.:.::..|.          
 Frog   125 PQALEQLV-QYAYT-AEIVVGEGNVQTLLPAASLLQLNGVRDACCKFLLSQLDPS---------- 177

  Fly    85 FKAFDVNCNGAISFRDLLVTLSTLLRGSVYERLRWTF---------------KLYDLNGDGRISR 134
                  ||.|...|.| ..:.|.||: |.::.:...|               ::.||.....::.
 Frog   178 ------NCLGIRGFAD-THSCSDLLK-SAHKYVLQHFVEVSKTEEFMLLPLKQVLDLISSDSLNV 234

  Fly   135 GELSEIILAI-----HELMGRRPHQP 155
            ....|:..|:     |::.|||.|.|
 Frog   235 PSEEEVYRAVLNWVKHDVDGRRQHVP 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 <80..188 CDD:444056 20/96 (21%)
klhl17XP_004916201.1 BTB_POZ_KLHL17_actinfilin 38..176 CDD:349555 15/52 (29%)
PHA03098 77..543 CDD:222983 36/156 (23%)
KELCH repeat 321..360 CDD:276965
KELCH repeat 364..407 CDD:276965
KELCH repeat 411..454 CDD:276965
KELCH repeat 458..502 CDD:276965
KELCH repeat 505..549 CDD:276965
KELCH repeat 552..597 CDD:276965
Kelch 564..608 CDD:128874
Blue background indicates that the domain is not in the aligned region.

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