DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5890 and kcnip4

DIOPT Version :10

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:XP_002936758.1 Gene:kcnip4 / 100491280 XenbaseID:XB-GENE-5753458 Length:233 Species:Xenopus tropicalis


Alignment Length:199 Identity:96/199 - (48%)
Similarity:147/199 - (73%) Gaps:4/199 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ESPIEEVVYELEHTRVPKPIPVALEDLCRQTKFTKQEIRVMYRGFKTECPEGVVHEDCFKDIYAK 70
            |..:|:   ||| |...:..|.|||.|..||||||:|::::|||||.|||.|:|:|:.||||||:
 Frog    37 EDNVED---ELE-TATVRHRPEALELLEAQTKFTKKELQILYRGFKNECPSGIVNEETFKDIYAQ 97

  Fly    71 FFPHGNSSLYAHYVFKAFDVNCNGAISFRDLLVTLSTLLRGSVYERLRWTFKLYDLNGDGRISRG 135
            |||.|::|.|||::|.|||.:.||::||.|.::.|||||||::.|:|.|.|.|||:|.||.|::.
 Frog    98 FFPQGDASTYAHFLFNAFDTDHNGSVSFEDFVIGLSTLLRGTIQEKLNWAFNLYDINKDGYITKE 162

  Fly   136 ELSEIILAIHELMGRRPHQPEDDRKARDQVDRVFRKLDLNQDGIITIEEFLEACLKDDLVTRSLQ 200
            |:.:|:.:|:::||:..:....:...|..|:..|:|:|:|:||::|||||:|:|.||:.:..|:|
 Frog   163 EMFDIMKSIYDMMGKCTYPLVREETPRQHVENFFQKMDINKDGVVTIEEFIESCQKDENIMCSMQ 227

  Fly   201 MFDN 204
            :|:|
 Frog   228 LFEN 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 <80..188 CDD:444056 48/107 (45%)
kcnip4XP_002936758.1 EFh 82..129 CDD:415501 27/46 (59%)
FRQ1 <111..218 CDD:444056 47/106 (44%)

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