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Protein Alignment CG5890 and ncald
DIOPT Version :10
| Sequence 1: | NP_001356889.1 |
Gene: | CG5890 / 43126 |
FlyBaseID: | FBgn0039380 |
Length: | 229 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001123413.1 |
Gene: | ncald / 100170190 |
XenbaseID: | XB-GENE-948387 |
Length: | 193 |
Species: | Xenopus tropicalis |
| Alignment Length: | 113 |
Identity: | 23/113 - (20%) |
| Similarity: | 44/113 - (38%) |
Gaps: | 35/113 - (30%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 40 PKKIR-KIMCYQTDNQKVVHPKHIANRHVGMAAMPVLQKTGIRKIPTENRNPHIKQMA-----RN 98
|:..| .:.|||...:::|..:....::......|:.::.|.. :.|:| ||
Frog 265 PESSRASLKCYQWLKERIVSEEGRKQQNKLKDLSPIAERLGCT----------LPQLAVAWCLRN 319
Fly 99 H--------DATPTKLVAHNYEN-------RKMVKHLTDKHDDEVRRK 131
. .:||.:|: || .||..|:.::.|:.:|.|
Frog 320 EGVSSVLLGSSTPEQLI----ENLGAIQVLPKMTSHVVNEIDNILRNK 363
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| CG5890 | NP_001356889.1 |
FRQ1 |
<80..188 |
CDD:444056 |
15/72 (21%) |
| ncald | NP_001123413.1 |
FRQ1 |
21..175 |
CDD:444056 |
|
|
Blue background indicates that the domain is not in
the aligned region.
|
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