DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5890 and kcnip2

DIOPT Version :10

Sequence 1:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster
Sequence 2:XP_003201187.2 Gene:kcnip2 / 100003947 ZFINID:ZDB-GENE-081031-91 Length:253 Species:Danio rerio


Alignment Length:179 Identity:88/179 - (49%)
Similarity:132/179 - (73%) Gaps:0/179 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PVALEDLCRQTKFTKQEIRVMYRGFKTECPEGVVHEDCFKDIYAKFFPHGNSSLYAHYVFKAFDV 90
            |.:|:.|...|||||.|::::||.||.:||.|||:|:.|:.||:.|||||:||.|||::|:|||.
Zfish    73 PDSLDKLMELTKFTKTELQILYRSFKNDCPTGVVNEETFQLIYSHFFPHGDSSAYAHFLFEAFDR 137

  Fly    91 NCNGAISFRDLLVTLSTLLRGSVYERLRWTFKLYDLNGDGRISRGELSEIILAIHELMGRRPHQP 155
            ..|||::|.|.:|.||.:|||:|.:||.|.|.|||||.||.|::.|:::|:.:|:::||:.....
Zfish   138 RKNGAVNFEDFVVGLSIILRGTVTDRLSWAFSLYDLNKDGCITKEEMNDIMKSIYDMMGKNTCPC 202

  Fly   156 EDDRKARDQVDRVFRKLDLNQDGIITIEEFLEACLKDDLVTRSLQMFDN 204
            .:|...|:.|:..|:|:|.|.||:||:|||||:|.||:.:..|:||.|:
Zfish   203 INDSAPREHVESFFQKMDRNNDGVITMEEFLESCQKDEAIMESMQMLDH 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5890NP_001356889.1 FRQ1 <80..188 CDD:444056 51/107 (48%)
kcnip2XP_003201187.2 None

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