DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4743 and SCaMC

DIOPT Version :8

Sequence 1:NP_651415.1 Gene:CG4743 / 43101 FlyBaseID:FBgn0039357 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_729802.1 Gene:SCaMC / 39415 FlyBaseID:FBgn0052103 Length:583 Species:Drosophila melanogaster

Alignment Length:292 Identity:74/293 (25%)
Similarity:130/293 (44%) Gaps:32/293 (11%)


  Fly    31 LVAGGVAGMVVDIALFPIDTVKTRLQ---SELG-------FWRAGGFRGIYKGLAPAAAGSAPTA 85
            |||||:||.|......|:|.:|..||   ..:|       ....||.|.:::|........||..
  Fly   289 LVAGGIAGAVSRTCTAPLDRIKVYLQVQTQRMGISECMHIMLNEGGSRSMWRGNGINVLKIAPET 353

  Fly    86 ALFFCTYECGKQFLSSVTQTKDSPYV-HMAAASAAEVLACLIRVPVEIAKQRSQTLQGNKQSGL- 148
            |..|..||..|:.:.....::....| ...|.:||..::..|..|:|:.|.|....:..:.:|: 
  Fly   354 AFKFAAYEQMKRLIRGDDGSRQMSIVERFYAGAAAGGISQTIIYPMEVLKTRLALRRTGQYAGIA 418

  Fly   149 QILLRAYRTEGLKRGLYRGFGSTIMREIPFSLIQFPLWEYFKLQWTPLTGFDSTP-FSVAL-CGA 211
            ...::.|:.||: |..|||:...|:..:|::.|...::|..|.::......:..| |.|.| ||:
  Fly   419 DAAVKIYKQEGV-RSFYRGYVPNILGILPYAGIDLAVYETLKRRYIANHDNNEQPSFLVLLACGS 482

  Fly   212 VAGGISAGLTTPLDVVKTRIMLAERESL-NRRR------------SARRILHGIY----LERGFS 259
            .:..:....:.||.:|:||:.....|:: |::|            |....:.|::    .:.|.:
  Fly   483 TSSTLGQLCSYPLALVRTRLQAQAAETIANQKRKTQIPLKSSDAHSGEETMTGLFRKIVRQEGLT 547

  Fly   260 GLFAGFVPRVLWITLGGAFFFGFYDLTTRILG 291
            ||:.|..|..|.:....:..:..|:.|:|.||
  Fly   548 GLYRGITPNFLKVLPAVSISYVVYEYTSRALG 579

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG4743NP_651415.1 Mito_carr 23..99 CDD:278578 25/78 (32%)
PTZ00168 25..281 CDD:185494 69/281 (25%)
Mito_carr 199..291 CDD:278578 26/111 (23%)
SCaMCNP_729802.1 FRQ1 100..247 CDD:227455
EFh 116..176 CDD:238008
EFh 186..242 CDD:238008
Mito_carr 285..370 CDD:278578 25/81 (31%)
Mito_carr 375..463 CDD:278578 22/89 (25%)
Mito_carr 470..581 CDD:278578 27/111 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C1995931
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
10.930

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