DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4743 and PMP34

DIOPT Version :10

Sequence 1:NP_651415.1 Gene:CG4743 / 43101 FlyBaseID:FBgn0039357 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_728982.1 Gene:PMP34 / 38532 FlyBaseID:FBgn0052250 Length:314 Species:Drosophila melanogaster


Alignment Length:313 Identity:76/313 - (24%)
Similarity:126/313 - (40%) Gaps:48/313 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KMQEPVNKLKFFHALVAGGVAGMVVDIALFPIDTVKTRLQSELGFWRAG---------------- 65
            |:.:.::...|.|| |:|...|.:.....:|:|||::|||.|    .||                
  Fly     6 KLSQVLSYQNFVHA-VSGAAGGCIAMSTFYPLDTVRSRLQLE----EAGDVRSTRQVIKEIVLGE 65

  Fly    66 GFRGIYKGLAPAAAGSAPTAALFFCTYECGKQFLSSVTQTKDSPYVHMAAASAAEVLACLIRVP- 129
            ||:.:|:||.|.......:..::|.|:...|...|..:.::.|....:...|.|.::..|...| 
  Fly    66 GFQSLYRGLGPVLQSLCISNFVYFYTFHALKAVASGGSPSQHSALKDLLLGSIAGIINVLTTTPF 130

  Fly   130 -VEIAKQRSQTLQGNKQSGLQILLRAYRT--EGLK--------RGLYRGFGSTIMREIPFSLIQF 183
             |...:.|.:.:.|....    :.:.|:.  ||||        .||:.|...::|. :....:||
  Fly   131 WVVNTRLRMRNVAGTSDE----VNKHYKNLLEGLKYVAEKEGIAGLWSGTIPSLML-VSNPALQF 190

  Fly   184 PLWEYFKLQWTPLTGFDSTPFSVALCGAVAGGISAGLTTPLDVVKTRIMLAERE----------S 238
            .::|..|......||.:....|....||:|...:..||.||.:|:|:.....:|          |
  Fly   191 MMYEMLKRNIMRFTGGEMGSLSFFFIGAIAKAFATVLTYPLQLVQTKQRHRSKESDSKPSTSAGS 255

  Fly   239 LNRRRSARRILHGIYLERGFSGLFAGFVPRVLWITLGGAFFFGFYDLTTRILG 291
            ..|..|...::..|...:|..|||.|...::|...|..|..|..|:.....:|
  Fly   256 TPRTESTLELMISILQHQGIRGLFRGLEAKILQTVLTAALMFMAYEKIAGTVG 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4743NP_651415.1 PTZ00168 25..281 CDD:185494 72/293 (25%)
PMP34NP_728982.1 Mito_carr 15..96 CDD:395101 24/85 (28%)
Mito_carr 105..202 CDD:395101 21/101 (21%)
Mito_carr 214..303 CDD:395101 24/88 (27%)

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