DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nepl16 and frma

DIOPT Version :10

Sequence 1:NP_001097912.1 Gene:Nepl16 / 43014 FlyBaseID:FBgn0039277 Length:752 Species:Drosophila melanogaster
Sequence 2:NP_572226.2 Gene:frma / 31464 FlyBaseID:FBgn0029769 Length:611 Species:Drosophila melanogaster


Alignment Length:682 Identity:126/682 - (18%)
Similarity:220/682 - (32%) Gaps:205/682 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 IQARLNWNKDPCTEFKKFSC--WRNTPNKNITNLIEMGNSQKSVDSQMLYLFQNKIMN------- 222
            :|.:.:...|||..|.|.:|  |         :.....:|.:|...::.|.:|.|:.:       
  Fly    17 VQVKSHPQADPCQNFYKVACGNW---------SASHATDSYESFMDRLDYNYQEKLADLLDNERE 72

  Fly   223 ----GSFGILHNLFESCLQQTTNSTVMHRIFDSL-------GGYLPVGSVGPSSIAPLIAKIYDL 276
                .....|.|.:.:|.:..:...|: ||.:.|       ...|.||......:..||    ||
  Fly    73 DDEPHFLQQLRNFYTACRKPLSQDQVL-RILEHLIVMENIQNEELSVGLTAAFRLQVLI----DL 132

  Fly   277 GPSPLVDLYHDLSYGRRPHILLIISGPSTSSTILERKIRWMSPKAPPSRIRQGVPKLLADLIENF 341
            ..|...|::..| ...|.|     ..|:|::            :.|.:  |:...||.|.|.:..
  Fly   133 NDSNTYDIWKQL-MSHRKH-----WDPNTTN------------REPLT--REMFDKLWASLPKIP 177

  Fly   342 LPYFVSYAQRVSEKDTIFEFIKDLNKLQVEHSRRGFWDSTVLYNVSSLQDLYPVLNWTLLIPQNW 406
            .|:...|.:.:||.:         .|:....|....:||..|               ...||..|
  Fly   178 FPFKEYYWRELSELE---------EKIMSYGSEDDGFDSGDL---------------VTRIPPFW 218

  Fly   407 SGPIVVRNSDY-----------LKALEYFLTKYPTRVAHNSLLLLSALQI----LPRDY---PSP 453
            ..|....|..|           :||.|:.||....|:.    |:...:..    :.||.   .|.
  Fly   219 MMPWPNGNITYENLSQMAHWLDIKANEFILTYIYMRLK----LVAEGVSTESWHIDRDQCAEQSR 279

  Fly   454 EVCTRSTMWALPELSSSLYIAQHSSEDLKDTTKRAEIIFKSLKAHLKR-------------APSL 505
            ::.:....|          :.:.:...||:     |.:.:.:.|.||:             ..|.
  Fly   280 QILSHPAAW----------LVEKNHPRLKE-----EPVLQDIFAELKQRFGQKLLANRNNFTRST 329

  Fly   506 KGAALVKLSALKIQSQTWEGFSNTTDLLKSLQPLNITSECWFQNILEIYKKNKLEPND------I 564
            :...|.||..::::              .|:.|.|.:::...:.|...|:...:..:|      |
  Fly   330 QHFLLGKLKRMRLR--------------LSILPRNSSAQSMVRRIERHYRDVHMNASDYFGNLHI 380

  Fly   565 SLN-GGSH----DAWA------------------------YPIVSTIFYDTLSHSIVVPLSVILI 600
            .|| ..||    ..||                        |...::.||....:.::||||::..
  Fly   381 GLNHSRSHKKYAQLWAIVFGRQLIPSRISKSDLYPTQVRGYGTYASAFYIVKQNMLIVPLSLLEP 445

  Fly   601 PYFNAVLPPYLHYASVGVSIAKEILRSITKSFDEKAMRCVPHSVNIFS----------------- 648
            |::....|..|.|:::|..:..|    ::..||.:.|....|.|...:                 
  Fly   446 PFYTHGQPSILTYSALGFILGHE----LSHGFDSEGMTFSSHGVGSSAVDRELDRNPRFQQELGC 506

  Fly   649 -----NYSRMDILIHSGGMQISYHSMLSLTGPIKGMARLPGLNLTPTQIFFLVSAQELCAESNYL 708
                 ...|.:....:.|::::|.:............|.....:|..|.||...||..|::...|
  Fly   507 LRRRFGRKRYEKFADASGLELAYSAYFDTAQTDHKRNRSAEELVTQKQQFFHNFAQFFCSDKELL 571

  Fly   709 GIDTNAPEFDNILGWLVAQGGSATEVFKC-PS 739
            ....:..:...: ...||......|.|.| ||
  Fly   572 QAHDHGSDRKRV-NDAVAHFEPFREAFSCGPS 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl16NP_001097912.1 GluZincin 176..750 CDD:472708 125/673 (19%)
frmaNP_572226.2 GluZincin 25..601 CDD:472708 123/671 (18%)

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