DRSC/TRiP Functional Genomics Resources

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Protein Alignment Stt3B and STT3B

DIOPT Version :10

Sequence 1:NP_524494.1 Gene:Stt3B / 43005 FlyBaseID:FBgn0011336 Length:774 Species:Drosophila melanogaster
Sequence 2:NP_174675.2 Gene:STT3B / 840312 AraportID:AT1G34130 Length:735 Species:Arabidopsis thaliana


Alignment Length:746 Identity:397/746 - (53%)
Similarity:509/746 - (68%) Gaps:46/746 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNRTPKMLNSKVAGYSS----------LITFAILLIAWLAGFSSRLFAVIRFESIIHEFDPWFNY 55
            |...|.:||:....:.|          |:..:||.:.::..|.:|||:|:|:||:||||||:|||
plant    13 MATKPDLLNTSFFSFKSLKLKTKQQELLLRISILGLVYILAFIARLFSVLRYESMIHEFDPYFNY 77

  Fly    56 RATAYMVQNGWYNFLNWFDERAWYPLGRIVGGTVYPGLMITSGGIHWLLHVLNIPVHIRDICVFL 120
            |.|.::.:.|:|.|.||||..:|||||||:|||:|||||:|:..|:|.|..|...||||::||..
plant    78 RTTLFLTEKGFYEFWNWFDSESWYPLGRIIGGTLYPGLMVTAALIYWTLRFLRFFVHIREVCVLT 142

  Fly   121 APIFSGLTSISTYLLTKELWSAGAGLFAASFIAIVPGYISRSVAGSYDNEGIAIFALQFTYFLWV 185
            ||.|:..|::..|...||||..||||.||..|||.|||||||||||||||.:|||||..|::|:|
plant   143 APFFASNTTLVAYFFGKELWDTGAGLVAAVLIAICPGYISRSVAGSYDNEAVAIFALLLTFYLFV 207

  Fly   186 RSVKTGSVFWSAAAALSYFYMVSAWGGYVFIINLIPLHVFVLLIMGRYSPRLLTSYSTFYILGLL 250
            ::|.|||:.|:.|:|..|||||||||||||||||:||:|.||||.||||.||..:|:..||||:|
plant   208 KAVNTGSLAWALASAFGYFYMVSAWGGYVFIINLVPLYVLVLLITGRYSMRLYIAYNCMYILGML 272

  Fly   251 FSMQIPFVGFQPIRTSEHMAALGVFVLLMAVATLRHLQSVLSRNEFRKLF---------IVGGLL 306
            .:|||.|||||.:::.|||.|:|||:|:.....|..::..|:..:..:.|         :|||:.
plant   273 LAMQIRFVGFQHVQSGEHMGAMGVFLLMQVFYFLDWVKYQLNDTKLFQTFLRITVTSAILVGGVA 337

  Fly   307 VGVGVFVAVVVLTMLGVVAPWSGRFYSLWDTGYAKIHIPIIASVSEHQPTTWFSFFFDLHILVCA 371
            ||||        |..|.::||:||||||.|..|||.||||||||||||||.|.||.||.|||:..
plant   338 VGVG--------TASGYISPWTGRFYSLLDPTYAKDHIPIIASVSEHQPTAWSSFMFDYHILLFL 394

  Fly   372 FPVGVWYCIKQINDERVFVVLYAISAVYFAGVMVRLMLTLTPVVCMLAGVAFSGLLDVFLQEDSS 436
            ||.|:::|.|::.|..:|:|:|.::::|||||||||:|..||.||:::.:|.|..:         
plant   395 FPAGLYFCFKRLTDATIFIVMYGLTSLYFAGVMVRLILVATPAVCLISAIAVSATI--------- 450

  Fly   437 KRMGTAISAATEVDEAEDSIEKKTLYDKAGKLKHRTKHDAQQDTGVSSNLKSIVILAVLMLLMMF 501
            |.:.:.:....:|.:...:       ..||..|..:|....|......|....:::.|..||..:
plant   451 KNLTSLLRTKQKVSQTGST-------KGAGSSKASSKVTLDQSQPFQKNGAIALLVGVFYLLSRY 508

  Fly   502 AVHCTWVTSNAYSSPSIVLAFHNSQDGSRNILDDFREAYYWLSQNTADDARVMSWWDYGYQIAGM 566
            |:||||||:.||||||||||...:. |:|.|.||:|||||||.||||.||::||||||||||..|
plant   509 AIHCTWVTAEAYSSPSIVLAARGAH-GNRIIFDDYREAYYWLRQNTATDAKIMSWWDYGYQITAM 572

  Fly   567 ANRTTLVDNNTWNNSHIALVGKAMSSTEEKSYEIMTSLDVDYVLVIFGGVIGYSGDDINKFLWMV 631
            .|||.:||||||||:|||.||:||||.|:.:|:||.||||:||||:||||.|||.||||||||||
plant   573 GNRTVIVDNNTWNNTHIATVGRAMSSYEDDAYDIMRSLDVNYVLVVFGGVTGYSSDDINKFLWMV 637

  Fly   632 RIAEGEHPKDIKESDYFTDRGEFRVDAEGAPALLNCLMYKLSYYRFGELKLDYRGPSGYDRTRNA 696
            ||..|..|. |||.||..: ||||||...:|.:||||||||.|||||||..:|..|.||||.|..
plant   638 RIGGGVFPV-IKEPDYLVN-GEFRVDKGASPKMLNCLMYKLCYYRFGELTTEYGKPPGYDRARGV 700

  Fly   697 VIGNKDFDLTYLEEAYTTEHWLVRIYRVKKP 727
            .|||||..|.:|||||||.:|:|||||||.|
plant   701 EIGNKDIKLEHLEEAYTTSNWIVRIYRVKPP 731

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Stt3BNP_524494.1 STT3 18..514 CDD:396873 245/504 (49%)
STT3BNP_174675.2 STT3 40..521 CDD:396873 245/504 (49%)

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