DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mah and AT3G28960

DIOPT Version :10

Sequence 1:NP_651316.1 Gene:mah / 42988 FlyBaseID:FBgn0285912 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_189538.2 Gene:AT3G28960 / 822536 AraportID:AT3G28960 Length:405 Species:Arabidopsis thaliana


Alignment Length:359 Identity:88/359 - (24%)
Similarity:158/359 - (44%) Gaps:48/359 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 VTLPALLVKLGYFGILLVLSIIILQIYTSFLLSQCWTMAELLDPSIQQKRNYPYAALAELAYGPY 148
            :::|..|.:.|:..:.|:|.:.:...|||.|:::|..    .|.:|   :.||  .:.|.|:|..
plant    35 LSVPYSLARGGWLSLSLLLLLAVTAFYTSLLITKCMN----ADRNI---KTYP--DIGERAFGRP 90

  Fly   149 MSLLVSVLLDLSIFAMAVPSVVMAAQNLE----GVVLRMSAGQYNFSYCYWAIIVGLVICPLMWL 209
            ..::|||.:.|.::.:....:::...||.    |..:.|...:.|....:.| .|..||.|.:|.
plant    91 GRIIVSVFMHLELYLVTTGFLILEGDNLHNLFPGFTIEMIGLRLNGKQAFMA-TVAFVIMPTLWW 154

  Fly   210 GSPKHMRGLAIIAVCVM-------IVIVALLWFCLFAAPAIGTPFEGISLELPGFLTVLNSYSIL 267
            .:      |::::...|       :.:.::.|...|  ..||...:|..:...|..|.|:.|   
plant   155 DN------LSVLSYVSMSGVLATTVTLGSISWIGAF--DGIGFHQKGKLINWSGIPTALSLY--- 208

  Fly   268 AFQFDIHPVLLTLQIDMKQKSQVSWAALIGIAITCSVAIFGSIIAAY-KFGSMIADNLLQSLP-- 329
            ||.:..||||.||...||.|.|.:...|| ..|.|::......:..| .:||.....:..:||  
plant   209 AFCYGAHPVLPTLYSSMKSKHQFNNVLLI-CFILCTIGYTSMAVLGYLMYGSQTLSQITLNLPIH 272

  Fly   330 ---TSVPFYVMLILMALQLCFSVTVASSAMFMQIENYFKLPESLSFK---RMLIRSSVLALEVLV 388
               :.|..|..|:....:....:|...:.    |:::|  |...|.|   .:||.:..:...|::
plant   273 KTSSKVAIYTTLVNPVAKYALMITPTVNT----IKDWF--PSRYSKKAYLHLLISTFFIISSVVI 331

  Fly   389 AEFVPSFDALMDVVGGTITGPLVFILPPLLYRRI 422
            ||.:|.|..:|.:||..::..:..:||.|.|.:|
plant   332 AETLPFFGYMMSLVGALLSVTVSILLPCLCYLKI 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mahNP_651316.1 SLC5-6-like_sbd 110..426 CDD:444915 83/333 (25%)
AT3G28960NP_189538.2 SLC5-6-like_sbd 14..398 CDD:444915 88/359 (25%)

Return to query results.
Submit another query.