DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lili and LMBR1

DIOPT Version :10

Sequence 1:NP_651290.1 Gene:lili / 42956 FlyBaseID:FBgn0027539 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_001337882.1 Gene:LMBR1 / 64327 HGNCID:13243 Length:531 Species:Homo sapiens


Alignment Length:105 Identity:26/105 - (24%)
Similarity:38/105 - (36%) Gaps:26/105 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  1479 DGTTAVSGSDDKTLIVWETKRGLALTSLQLHVQFTRFDISLECS--------RIVVQLVDNS-CL 1534
            ||..|..||..::|..|...:..:|......|..  :||   ||        .:..::.:|| .|
Human    59 DGDVAGPGSSPRSLEEWPDPKDWSLQDTDAFVLV--YDI---CSPDSFDYVKALRQRIAENSRGL 118

  Fly  1535 PIICLH---------NSPASYIKLPTYSAPARDVEDLRPA 1565
            ..||.|         :|.||.|.:   ..|.|......|:
Human   119 AFICTHGVGSSGHGVSSTASLISI---GPPGRREHQRHPS 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
liliNP_651290.1 LMBR1 65..500 CDD:461429
LMBR1NP_001337882.1 LMBR1 23..491 CDD:461429 26/105 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.