DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6980 and stip1

DIOPT Version :10

Sequence 1:NP_651289.1 Gene:CG6980 / 42955 FlyBaseID:FBgn0039228 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_989360.1 Gene:stip1 / 394990 XenbaseID:XB-GENE-958361 Length:543 Species:Xenopus tropicalis


Alignment Length:196 Identity:51/196 - (26%)
Similarity:90/196 - (45%) Gaps:34/196 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 KVKENRTVIN--RKSLEEDNEKQVKDMNQKSFMEQVEKDANDRAEARAKAEYEAELQRSQGNEAF 139
            |.::|:..|:  .|||.|....:|....|::  |::.|:....|........|   ::|:|||:|
 Frog   312 KEEKNKEAIHFFNKSLAEHRTPEVLKKCQQA--EKILKEQERLAYINPDLALE---EKSKGNESF 371

  Fly   140 RSQKYEKAILHYDKAIIKVKDSAITYCNRALCYIKLQNYKRALKDCQYVLEKLQESNLRAWLYQA 204
            :...|.:|:.||.:||.:..:.|..|.|||.||.||..::.|||||:..: :|:...::.:..:|
 Frog   372 QKGDYPQAMKHYTEAIKRNPNDAKLYSNRAACYTKLLEFQLALKDCEECI-RLEPKFIKGYTRKA 435

  Fly   205 HAYKGLKQDDKFEESVVKARE--------------------------HNPKQLAYIDKYIKQLEA 243
            .|.:.:|...|..:...||.|                          .:.|:.|..|..::|:.:
 Frog   436 AALEAMKDYSKAMDVYQKAMELDSTCKEATDGYQRCMMSQYHRNDSPEDVKRRAMADPEVQQIMS 500

  Fly   244 D 244
            |
 Frog   501 D 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6980NP_651289.1 Spy 117..>233 CDD:443119 36/141 (26%)
TPR repeat 128..156 CDD:276809 10/27 (37%)
TPR repeat 161..192 CDD:276809 14/30 (47%)
TPR repeat 197..225 CDD:276809 6/27 (22%)
stip1NP_989360.1 3a0801s09 <2..532 CDD:273380 51/196 (26%)
TPR repeat 4..32 CDD:276809
TPR repeat 37..67 CDD:276809
TPR repeat 72..100 CDD:276809
TPR repeat 225..253 CDD:276809
TPR 253..>454 CDD:440225 43/147 (29%)
TPR repeat 258..288 CDD:276809
TPR repeat 300..328 CDD:276809 5/15 (33%)
TPR repeat 364..388 CDD:276809 10/23 (43%)
TPR repeat 393..423 CDD:276809 14/30 (47%)
TPR repeat 428..456 CDD:276809 6/27 (22%)
Blue background indicates that the domain is not in the aligned region.

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