DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6980 and Stip1

DIOPT Version :8

Sequence 1:NP_651289.1 Gene:CG6980 / 42955 FlyBaseID:FBgn0039228 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_477354.1 Gene:Stip1 / 33202 FlyBaseID:FBgn0024352 Length:490 Species:Drosophila melanogaster

Alignment Length:156 Identity:48/157 (31%)
Similarity:74/157 (47%) Gaps:12/157 (8%)


  Fly    93 DNEKQVKDMNQKSFMEQVE---KDANDRAEARAKAE--------YEAELQRSQGNEAFRSQKYEK 146
            :|.||.|...:|:..|...   |.:....||:.|.|        .:||.::.|||..|:...|..
  Fly   264 ENYKQAKVYYEKAMSEHRTPEIKTSLSEVEAKIKEEERMAYINPEKAEEEKEQGNLFFKKGDYST 328

  Fly   147 AILHYDKAIIKVKDSAITYCNRALCYIKLQNYKRALKDCQYVLEKLQESNLRAWLYQAHAYKGLK 211
            |:.||.:||.:..|....|.|||.||.||..:...||||...: ||.|..::.::.:....:|::
  Fly   329 AVKHYTEAIKRNPDDPKLYSNRAACYTKLAAFDLGLKDCDTCI-KLDEKFIKGYIRKGKILQGMQ 392

  Fly   212 QDDKFEESVVKAREHNPKQLAYIDKY 237
            |..|.:.:..||.|.:|.....|:.|
  Fly   393 QQSKAQAAYQKALELDPNNAEAIEGY 418

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG6980NP_651289.1 TPR_11 127..190 CDD:290150 25/63 (40%)
TPR repeat 128..156 CDD:276809 12/28 (43%)
TPR repeat 161..192 CDD:276809 13/31 (42%)
TPR_1 162..190 CDD:278916 12/28 (43%)
TPR repeat 197..225 CDD:276809 5/28 (18%)
Stip1NP_477354.1 TPR_11 6..69 CDD:290150
TPR repeat 7..32 CDD:276809
TPR repeat 37..67 CDD:276809
TPR_11 40..103 CDD:290150
TPR repeat 72..100 CDD:276809
TPR_11 175..237 CDD:290150
TPR repeat 175..203 CDD:276809
TPR_1 181..208 CDD:278916
TPR_12 205..278 CDD:290160 5/14 (36%)
TPR repeat 208..238 CDD:276809
TPR repeat 250..278 CDD:276809 5/14 (36%)
TPR_1 250..>276 CDD:278916 5/12 (42%)
TPR_11 309..375 CDD:290150 27/67 (40%)
TPR repeat 310..338 CDD:276809 12/28 (43%)
TPR_1 <317..343 CDD:278916 10/26 (38%)
TPR repeat 343..373 CDD:276809 13/31 (42%)
TPR_1 378..411 CDD:278916 7/33 (21%)
TPR repeat 378..406 CDD:276809 5/28 (18%)
STI1 439..478 CDD:128966
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E2759_KOG0548
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
10.900

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