DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6980 and Stip1

DIOPT Version :10

Sequence 1:NP_651289.1 Gene:CG6980 / 42955 FlyBaseID:FBgn0039228 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_477354.1 Gene:Stip1 / 33202 FlyBaseID:FBgn0024352 Length:490 Species:Drosophila melanogaster


Alignment Length:156 Identity:48/156 - (30%)
Similarity:74/156 - (47%) Gaps:12/156 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 DNEKQVKDMNQKSFMEQVE---KDANDRAEARAKAE--------YEAELQRSQGNEAFRSQKYEK 146
            :|.||.|...:|:..|...   |.:....||:.|.|        .:||.::.|||..|:...|..
  Fly   264 ENYKQAKVYYEKAMSEHRTPEIKTSLSEVEAKIKEEERMAYINPEKAEEEKEQGNLFFKKGDYST 328

  Fly   147 AILHYDKAIIKVKDSAITYCNRALCYIKLQNYKRALKDCQYVLEKLQESNLRAWLYQAHAYKGLK 211
            |:.||.:||.:..|....|.|||.||.||..:...||||...: ||.|..::.::.:....:|::
  Fly   329 AVKHYTEAIKRNPDDPKLYSNRAACYTKLAAFDLGLKDCDTCI-KLDEKFIKGYIRKGKILQGMQ 392

  Fly   212 QDDKFEESVVKAREHNPKQLAYIDKY 237
            |..|.:.:..||.|.:|.....|:.|
  Fly   393 QQSKAQAAYQKALELDPNNAEAIEGY 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6980NP_651289.1 Spy 117..>233 CDD:443119 39/123 (32%)
TPR repeat 128..156 CDD:276809 11/27 (41%)
TPR repeat 161..192 CDD:276809 12/30 (40%)
TPR repeat 197..225 CDD:276809 5/27 (19%)
Stip1NP_477354.1 TPR repeat 7..32 CDD:276809
TPR 10..276 CDD:440225 4/11 (36%)
TPR repeat 37..67 CDD:276809
TPR repeat 72..100 CDD:276809
LapB 173..415 CDD:442196 46/151 (30%)
TPR repeat 175..203 CDD:276809
TPR repeat 208..238 CDD:276809
TPR repeat 250..278 CDD:276809 5/13 (38%)
TPR repeat 310..338 CDD:276809 11/27 (41%)
TPR repeat 343..373 CDD:276809 12/30 (40%)
TPR repeat 378..406 CDD:276809 5/27 (19%)
STI1 429..482 CDD:436075
Blue background indicates that the domain is not in the aligned region.

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