DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13616 and CG42812

DIOPT Version :10

Sequence 1:NP_651262.1 Gene:CG13616 / 42917 FlyBaseID:FBgn0039200 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_001097901.2 Gene:CG42812 / 50072 FlyBaseID:FBgn0261994 Length:217 Species:Drosophila melanogaster


Alignment Length:126 Identity:29/126 - (23%)
Similarity:52/126 - (41%) Gaps:27/126 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 HAHGLNATLAKDTIKRRSRRAFYDEVQSLFDNMGFNGRSCVARALCESAKFMLPSVERGNMLQEL 161
            |.:| |....||.    |....|..::......||: .:|:.|::||.|:.......: ::|.::
  Fly   102 HDNG-NGMHPKDF----SAGELYAFLEDTLTGYGFH-ETCLLRSVCELAQHPFDDSHQ-HLLSDI 159

  Fly   162 VRTVFSLPPSPVAAHEPQAHHQY---DRIYRRSKRSS-------RDCHEIYPGCQFSLLAL 212
            |..|.|          |..|..:   :.:||::...:       |||..:|..|:..:|.|
  Fly   160 VTFVLS----------PSQHEGFRDDEDVYRKAYELAEQDGFLGRDCLRLYSHCKHDILQL 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13616NP_651262.1 DM4_12 110..212 CDD:214785 23/111 (21%)
CG42812NP_001097901.2 DM4_12 110..210 CDD:214785 25/115 (22%)

Return to query results.
Submit another query.