DRSC/TRiP Functional Genomics Resources

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Protein Alignment twin and AT4G30900

DIOPT Version :10

Sequence 1:NP_732964.1 Gene:twin / 42880 FlyBaseID:FBgn0011725 Length:567 Species:Drosophila melanogaster
Sequence 2:NP_194819.3 Gene:AT4G30900 / 829214 AraportID:AT4G30900 Length:316 Species:Arabidopsis thaliana


Alignment Length:427 Identity:81/427 - (18%)
Similarity:128/427 - (29%) Gaps:159/427 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 LTYMLDNLSFTVNPPPQRPWLPLAKPN---KTRPACIFTVMCYNVLCDKYATRQMYGYCPSWALC 234
            ::..|..:||.::..     ||...||   |.:..|:..:..|:.:                .||
plant     1 MSVSLSVMSFNLHDD-----LPEESPNSWLKRKDLCLTVITSYSPI----------------VLC 44

  Fly   235 WEYRKKSIIDEIRH--YAADIISLQEIETEQFYHFFLPELKNDGYEGIFSPKSRAKTMSELERKY 297
            .:...||.:|.::.  .|.|...:....         |...||                      
plant    45 TQQGVKSQLDYLQQGLPAYDQFGISRTG---------PGDAND---------------------- 78

  Fly   298 VDGCAIFFRASKFTLIKES---LIEFNQLAMANAEGSDNMLNRVMPKDNIGLAALLKVKENAWEP 359
             :.|.|||...|..|::..   |.|...:..:.|.||      .:|  .|...|..::|  ..||
plant    79 -EHCTIFFNKEKVELLEGGTFWLSESPSVPGSTAWGS------AVP--CIATWATFQLK--GAEP 132

  Fly   360 MSEVTQISQPLLVCTAHIHWDPEFCDVKLIQTMMLSNELKTIIDEASHSFRPGHKNDS------- 417
            .....||                               :.|.:||.|    |..:..|       
plant   133 PGFSFQI-------------------------------VNTNLDEIS----PRARRRSALLTWQH 162

  Fly   418 -----NAVQLLLCGDFNSLPDSGVVEFLGKGRVSMDHLDFKDMGYKSCLQRLLSNDTNEFTHSFK 477
                 ..:.::.||.||:..:|....|| .|| |.:|....||.......|:..|        ..
plant   163 IASLPPTLPVVYCGGFNTQKESTTGRFL-LGR-SREHGVVGDMRDAWPSARVRKN--------VA 217

  Fly   478 LASAYNEDIMPHTNYTFDFKGII-----------------DYIFYTKTGMVPLGLLGPVSNDWLR 525
            |...|: |.......|.:|..:|                 |:|.|....:||  ::..:.||.:.
plant   218 LIRTYH-DFKGDKQGTVEFLKLIFRALCLCWDRQTQDLHTDWILYRGRSIVP--VMCEIVNDKID 279

  Fly   526 ENKVVGCPHPHIPSDHFPLLVELELMHTAS--QQAPP 560
            :         ..||.|:|:..|..|..:..  :..||
plant   280 D---------LYPSSHYPVFAEFMLPRSVRMLEPTPP 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twinNP_732964.1 LRR <52..>155 CDD:443914
leucine-rich repeat 76..98 CDD:275378
leucine-rich repeat 99..121 CDD:275378
leucine-rich repeat 122..144 CDD:275378
leucine-rich repeat 145..156 CDD:275378
Deadenylase_CCR4 209..550 CDD:197331 69/374 (18%)
AT4G30900NP_194819.3 EEP-1 6..293 CDD:197317 76/406 (19%)
Blue background indicates that the domain is not in the aligned region.

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