DRSC/TRiP Functional Genomics Resources

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Protein Alignment twin and Angel1

DIOPT Version :10

Sequence 1:NP_732964.1 Gene:twin / 42880 FlyBaseID:FBgn0011725 Length:567 Species:Drosophila melanogaster
Sequence 2:XP_011242471.1 Gene:Angel1 / 68737 MGIID:1915987 Length:690 Species:Mus musculus


Alignment Length:686 Identity:140/686 - (20%)
Similarity:235/686 - (34%) Gaps:207/686 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 MKGNHYKMSRNKDKYDSANRRQQIFLSQEDIAAGKKTNWSGLEITGCVRNISPSLWEFEHLTALY 80
            ::||.....|..|:.:.....||          .::..|:....|.....::........|..|.
Mouse    64 VEGNFAMAPRGPDQEECEGLLQQ----------WREEGWNQTPSTASEGPLADKGLAESSLALLM 118

  Fly    81 LNDNQLLRLPADVGMLTSLRTLDLSSNKLRSLPAELGELIQLRELL--LNNNFLRVLPYEIGKLF 143
            .|..:......|......|..|..:.|..:..|..|||     |.|  :.......:|.:.|..:
Mouse   119 DNSGEQDAASEDKWSSRQLSDLRAAENLNQPFPEVLGE-----EPLAEVEGPLWAAVPVQTGPQY 178

  Fly   144 ---HLVILGLMGNPLQKE-----FMNIYNEPNGTQKLLTYMLDNLSFTVNPPPQ---------RP 191
               .::.:|.|.....:|     ..:|..||...::...:..:.|. .:.|||.         |.
Mouse   179 ADCAVLPMGAMAAEQWEEDPAMVAWSIAPEPMPQEETSMWPFEGLE-QLQPPPMEIPYHEILWRE 242

  Fly   192 WLPLAKPNKTR-------PACIFTVMCYNVLCD--KYATRQMYGYCPSWALCWEYRKKSIIDEIR 247
            |...:.....:       |...||:|.||:|..  ...:.::|.:|....|.|.||..:::.|.:
Mouse   243 WEDFSTQPDAQGLEAGDGPQFQFTLMSYNILAQDLMQQSSELYLHCHPDILNWNYRFANLMQEFQ 307

  Fly   248 HYAADIISLQEIETEQFYHFFLPELKNDGYEGIFSPKSRAKTMSELERKYVDGCAIFFRASKFTL 312
            |:..||:.|||::.:.::....|.|:..|:...:..::..||         ||||:.::.::|.|
Mouse   308 HWDPDILCLQEVQEDHYWEQLEPSLRMMGFTCFYKRRTGCKT---------DGCAVCYKPTRFRL 363

  Fly   313 IKESLIEFNQLAMANAEGSDNMLNRVMPKDNIGLAALLKVKENAWEPM--SEVTQIS-QPLLVCT 374
            :..|.:|:.:..:       .:|||    ||:||..||       :|:  ..:.|:| .||.|..
Mouse   364 LCASPVEYFRPGL-------ELLNR----DNVGLVLLL-------QPLVPEGLGQVSVAPLCVAN 410

  Fly   375 AHIHWDPEFCDVKLIQTMMLSNELKTI--IDEASHSFRPGHKNDSNAVQLLLCGDFNSLPDSGVV 437
            .|:.::|...||||.|..:|..|:..:  :.:.||            ..::||||.||:|||.:.
Mouse   411 THVLYNPRRGDVKLAQMAILLAEVDKVARLSDGSH------------CPIILCGDLNSVPDSPLY 463

  Fly   438 EFLGKGRVSMDHL---------DF---------------KDMGYKSCLQRLLS------------ 466
            .|:..|.:..:.:         ||               ..:|...|.|.:.|            
Mouse   464 NFIRDGELQYNGMPAWKVSGQEDFSHQLYQRKLQAPLWPSSLGITDCCQYVTSCHPKRSERLKYG 528

  Fly   467 --------------------------NDT----------------------------NEFTHSFK 477
                                      .||                            ....|...
Mouse   529 RDFLLRFRFCDLACQRPVGLVLMEGVTDTKPDRPAGWAECIFEEEISELEPVFPRTIGTIQHCLH 593

  Fly   478 LASAYNEDIMPH-----TNYTFDFKGIIDYIFYT---------------KTGMVPLGLLGPVSND 522
            |.|.|...:..|     |.........:||||::               :.|  .|.|||.:|  
Mouse   594 LTSVYTHFLPQHGCPEVTTMPLGLGMTVDYIFFSAESCENENRTDHRLDRDG--TLKLLGRLS-- 654

  Fly   523 WLRENKVV----GCPHPHIPSDHFPLLVELELMHTA 554
             |...:::    |.|:|...|||..||....:..||
Mouse   655 -LLSEEILWAANGLPNPFYSSDHLCLLASFGMEVTA 689

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twinNP_732964.1 LRR <52..>155 CDD:443914 19/107 (18%)
leucine-rich repeat 76..98 CDD:275378 4/21 (19%)
leucine-rich repeat 99..121 CDD:275378 7/21 (33%)
leucine-rich repeat 122..144 CDD:275378 4/26 (15%)
leucine-rich repeat 145..156 CDD:275378 2/10 (20%)
Deadenylase_CCR4 209..550 CDD:197331 100/461 (22%)
Angel1XP_011242471.1 EEP 268..683 CDD:469791 100/458 (22%)

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