DRSC/TRiP Functional Genomics Resources

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Protein Alignment twin and Angel1

DIOPT Version :10

Sequence 1:NP_732964.1 Gene:twin / 42880 FlyBaseID:FBgn0011725 Length:567 Species:Drosophila melanogaster
Sequence 2:XP_017449718.1 Gene:Angel1 / 362765 RGDID:1306238 Length:690 Species:Rattus norvegicus


Alignment Length:606 Identity:130/606 - (21%)
Similarity:215/606 - (35%) Gaps:200/606 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 LTSLRTLDLSSNKLRSLPAELGELIQLRELLLNNN--FLRVLPYEIGKLF---HLVILGLMGNPL 155
            |:.||..|   |..:..|..|||     |.|..:.  ....:|.:.|..:   .::.:|.|....
  Rat   137 LSDLRAAD---NLDQPFPEVLGE-----EPLAEDEGPLWAAVPVQTGPQYADCAVLPMGAMAAEQ 193

  Fly   156 QKE-----FMNIYNEPNGTQKLLTYMLDNLSFTVNPPPQ---------RPWLPLAKPNKTR---- 202
            .:|     ..:|..||...::...:..:.|. .:.|||.         |.|...:.....:    
  Rat   194 WEEDPAMVAWSIAPEPMPQEETSMWPFEGLE-QLQPPPMEIPYHEILWREWEDFSTQPDAQGLEA 257

  Fly   203 ---PACIFTVMCYNVLCD--KYATRQMYGYCPSWALCWEYRKKSIIDEIRHYAADIISLQEIETE 262
               |...||:|.||:|..  ...:.::|.:|....|.|.||..:::.|.:|:..||:.|||::.:
  Rat   258 GDGPQFQFTLMSYNILAQDLMQQSSELYLHCHPDILNWNYRFANLMQEFQHWDPDILCLQEVQED 322

  Fly   263 QFYHFFLPELKNDGYEGIFSPKSRAKTMSELERKYVDGCAIFFRASKFTLIKESLIEFNQLAMAN 327
            .::....|.|:..|:...:..::..||         ||||:.::.::|.|:..|.:|:.:..:  
  Rat   323 HYWEQLEPSLRMMGFTCFYKRRTGCKT---------DGCAVCYKPTRFRLLCASPVEYFRPGL-- 376

  Fly   328 AEGSDNMLNRVMPKDNIGLAALLKVKENAWEPM--SEVTQIS-QPLLVCTAHIHWDPEFCDVKLI 389
                 .:|||    ||:||..||       :|:  ..:.|:| .||.|...|:.::|...||||.
  Rat   377 -----ELLNR----DNVGLVLLL-------QPLVPEGLGQVSVAPLCVANTHVLYNPRRGDVKLA 425

  Fly   390 QTMMLSNELKTI--IDEASHSFRPGHKNDSNAVQLLLCGDFNSLPDSGVVEFLGKGRVSMDHL-- 450
            |..:|..|:..:  :.:.||            ..::||||.||:|||.:..|:..|.:..:.:  
  Rat   426 QMAILLAEVDKVARLSDGSH------------CPIILCGDLNSVPDSPLYNFIRDGELQYNGMPA 478

  Fly   451 -------DF---------------KDMGYKSCLQRLLS--------------------------- 466
                   ||               ..:|...|.|.:.|                           
  Rat   479 WKVSGQEDFSHQLYQRKLQAPLWPSSLGITDCCQYVTSCHPKRSERLKYGRDFLLRFRFCDLACQ 543

  Fly   467 -----------NDT----------------------------NEFTHSFKLASAYNEDIMPH--- 489
                       .||                            ....|...|.|.|...:..|   
  Rat   544 RPVGLVLMEGVTDTKPDRPAGWAECIFEEEISELEPVFPRTIGTIQHCLHLTSVYTHFLPQHGRP 608

  Fly   490 --TNYTFDFKGIIDYIFYT---------------KTGMVPLGLLGPVSNDWLRENKVV----GCP 533
              |.........:||||::               :.|  .|.|||.:|   |...:::    |.|
  Rat   609 EVTTMPLGLGMTVDYIFFSAESCENENRSDHRLDRDG--TLKLLGRLS---LLSEEILWAANGLP 668

  Fly   534 HPHIPSDHFPLLVELELMHTA 554
            :|...|||..||....:..||
  Rat   669 NPFYSSDHLCLLASFGMEVTA 689

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
twinNP_732964.1 LRR <52..>155 CDD:443914 15/63 (24%)
leucine-rich repeat 76..98 CDD:275378 1/1 (100%)
leucine-rich repeat 99..121 CDD:275378 8/21 (38%)
leucine-rich repeat 122..144 CDD:275378 4/26 (15%)
leucine-rich repeat 145..156 CDD:275378 2/10 (20%)
Deadenylase_CCR4 209..550 CDD:197331 100/461 (22%)
Angel1XP_017449718.1 EEP 268..683 CDD:469791 100/458 (22%)

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