DRSC/TRiP Functional Genomics Resources

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Protein Alignment twin and angel2

DIOPT Version :10

Sequence 1:NP_732964.1 Gene:twin / 42880 FlyBaseID:FBgn0011725 Length:567 Species:Drosophila melanogaster
Sequence 2:XP_002934749.2 Gene:angel2 / 100379750 XenbaseID:XB-GENE-985562 Length:526 Species:Xenopus tropicalis


Alignment Length:503 Identity:119/503 - (23%)
Similarity:191/503 - (37%) Gaps:159/503 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 PLQK-----EFMNIYNEPNGTQKLLTYMLDNLSFTVNPPP------------QRPW-------LP 194
            ||.|     |..::..:|..:.......:..|.....|||            .|.|       ..
 Frog    75 PLPKRKRTREEEHVEQKPKSSSPTKDIRVPPLHAPPGPPPTAKHSAAVKGVISRRWEDFNLYYSE 139

  Fly   195 LAKPNKT---RPACI-FTVMCYNVLCDKYA--TRQMYGYCPSWALCWEYRKKSIIDEIRHYAADI 253
            |:|.|:.   .|... |||:.||:|.....  ...:|.:|....|.|.||..:|:.|:....|||
 Frog   140 LSKWNRVFGRDPEYFDFTVLSYNILSQDLLEDNSHLYDHCRRPLLFWSYRLPNILKELVDLNADI 204

  Fly   254 ISLQEIETEQFYHFFLPELKNDGYEGIFSPKSRAKTMSELERKYVDGCAIFFRASKFTLIKESLI 318
            :.|||::.:.:.....|.|::.||...:..::.:|.         |||||.|:|:||:|:..:.:
 Frog   205 LCLQEVQEDHYTTQIKPSLESLGYHCEYKTRTGSKP---------DGCAICFKANKFSLVSVTPV 260

  Fly   319 EFNQLAMANAEGSDNMLNRVMPKDNIGLAALLKVKENAWEPMSEVTQISQPLLVCTAHIH--WDP 381
            |:.:..::           ::.:|||||..||:.|.....|           ::|.|:.|  ::|
 Frog   261 EYYRPNIS-----------LLDRDNIGLVLLLRPKSQRVAP-----------VICVANTHLLYNP 303

  Fly   382 EFCDVKLIQTMMLSNELKTIIDEASHSFRPGHKNDSNAVQLLLCGDFNSLPDSGVVEFLGKGRVS 446
            ...|:||.|..:|..|:.::.......|.|          ::|||||||:|.|.:..|:.:||::
 Frog   304 RRGDIKLAQLAILLAEITSVAFTGEKGFCP----------IVLCGDFNSVPGSPLHSFIREGRLN 358

  Fly   447 MDHLDF----------------------KDMGY-KSCLQRLLSNDTN------------------ 470
            .:.|..                      |.:|. ::|:...:.|..|                  
 Frog   359 YEGLSIGKVSGQEQYPRGQKILSIPIWPKSLGISQNCVYEPMENAWNAAEMVDKESVGNSARNRQ 423

  Fly   471 ---EFTHSFKLASAYNEDIMPHTNYTFDFKGI-------------IDYIFY------------TK 507
               ..:|.|.|:|.|        .:.|...||             :|||||            |.
 Frog   424 VEPSLSHHFSLSSVY--------THFFPGSGIPEITTCHSRCALTVDYIFYSAAANDLFAQLGTN 480

  Fly   508 TGMVPLGLLGPVS-----NDWLRENKVVGCPHPHIPSDHFPLLVELEL 550
            :....|.|||.:|     :.|    .|.|.|:....|||..||.:..|
 Frog   481 SSQNGLQLLGRLSLLTEQDLW----SVNGLPNETNSSDHLSLLAKFRL 524

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity