DRSC/TRiP Functional Genomics Resources

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Protein Alignment mora and PBS2

DIOPT Version :10

Sequence 1:NP_651226.1 Gene:mora / 42874 FlyBaseID:FBgn0029503 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_568762.6 Gene:PBS2 / 835244 AraportID:AT5G51700 Length:226 Species:Arabidopsis thaliana


Alignment Length:222 Identity:66/222 - (29%)
Similarity:94/222 - (42%) Gaps:39/222 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QCYNRGCGQLFDPQTNNDESCRHHPGEPFFHDAYKGWSCCNKKSVDFTEFLNIKGCTLAKHSNVK 67
            ||...||..:|....|...||:.|...|||||..|.||||.::|.||:.||.|.||...||:..|
plant    11 QCQRIGCNAMFTDDDNPQGSCQFHASGPFFHDGMKEWSCCKQRSHDFSLFLEIPGCKTGKHTTEK 75

  Fly    68 P-----------------PEPEKPVKDESDK--------DEVIEVRAPIREALPRPPIDSPLTVI 107
            |                 |:.....||...:        |...:.:..|::.| ..|..:....|
plant    76 PVLAKSVPKHPVAAPTSSPDANAATKDSCSRCRQGFFCSDHGSQPKEQIKQTL-NTPGQAEEEKI 139

  Fly   108 QPTVAPALKDMVFAVKTPAAQKSSDAIEVGTTCKNNGCTYSFTGNSSDFGECTYHPGVPIFHEGM 172
            :| :||.::..|..:..|            ..|||.||..:|....:....|::|||..:||:.:
plant   140 EP-LAPPVQKAVIDINQP------------QVCKNKGCGQTFKERDNHETACSHHPGPAVFHDRL 191

  Fly   173 KFWSCCQKRTSDFSQFMAQKGCTYGEH 199
            :.|.||.....:|.:||....||.|.|
plant   192 RGWKCCDVHVKEFDEFMEIPPCTKGWH 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
moraNP_651226.1 CHORD 3..63 CDD:461502 27/59 (46%)
CHORD 138..199 CDD:461502 21/60 (35%)
p23_melusin_like 213..301 CDD:107238
PBS2NP_568762.6 CHORD 10..71 CDD:461502 27/59 (46%)
CHORD 157..218 CDD:461502 21/60 (35%)
Blue background indicates that the domain is not in the aligned region.

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