DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CHORD and PBS2

DIOPT Version :9

Sequence 1:	NP_651226.1	Gene:	CHORD / 42874	FlyBaseID:	FBgn0029503	Length:	354	Species:	Drosophila melanogaster
Sequence 2:	NP_568762.6	Gene:	PBS2 / 835244	AraportID:	AT5G51700	Length:	226	Species:	Arabidopsis thaliana

Alignment Length:	222	Identity:	66/222 - (29%)
Similarity:	94/222 - (42%)	Gaps:	39/222 - (17%)

- Green bases have known domain annotations that are detailed below.

  Fly     3 QCYNRGCGQLFDPQTNNDESCRHHPGEPFFHDAYKGWSCCNKKSVDFTEFLNIKGCTLAKHSNVK 67
            ||...||..:|....|...||:.|...|||||..|.||||.::|.||:.||.|.||...||:..|
plant    11 QCQRIGCNAMFTDDDNPQGSCQFHASGPFFHDGMKEWSCCKQRSHDFSLFLEIPGCKTGKHTTEK 75

  Fly    68 P-----------------PEPEKPVKDESDK--------DEVIEVRAPIREALPRPPIDSPLTVI 107
            |                 |:.....||...:        |...:.:..|::.| ..|..:....|
plant    76 PVLAKSVPKHPVAAPTSSPDANAATKDSCSRCRQGFFCSDHGSQPKEQIKQTL-NTPGQAEEEKI 139

  Fly   108 QPTVAPALKDMVFAVKTPAAQKSSDAIEVGTTCKNNGCTYSFTGNSSDFGECTYHPGVPIFHEGM 172
            :| :||.::..|..:..|            ..|||.||..:|....:....|::|||..:||:.:
plant   140 EP-LAPPVQKAVIDINQP------------QVCKNKGCGQTFKERDNHETACSHHPGPAVFHDRL 191

  Fly   173 KFWSCCQKRTSDFSQFMAQKGCTYGEH 199
            :.|.||.....:|.:||....||.|.|
plant   192 RGWKCCDVHVKEFDEFMEIPPCTKGWH 218

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CHORD	NP_651226.1	CHORD	3..63	CDD:282781	27/59 (46%)
		CHORD	138..199	CDD:282781	21/60 (35%)
		p23_melusin_like	213..301	CDD:107238
PBS2	NP_568762.6	CHORD	10..71	CDD:398569	27/59 (46%)
PBS2	NP_568762.6	CHORD	157..218	CDD:398569	21/60 (35%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	71	1.000	Domainoid score	I3345
eggNOG	1	0.900	-	-		E1_KOG1667
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H8111
Inparanoid	1	1.050	117	1.000	Inparanoid score	I2002
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1163528at2759
OrthoFinder	1	1.000	-	-		FOG0002255
OrthoInspector	1	1.000	-	-		oto4022
orthoMCL	1	0.900	-	-		OOG6_102230
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X1489
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	11	10.770