| Sequence 1: | NP_651226.1 | Gene: | CHORD / 42874 | FlyBaseID: | FBgn0029503 | Length: | 354 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001101598.1 | Gene: | Chordc1 / 315447 | RGDID: | 1304679 | Length: | 331 | Species: | Rattus norvegicus |
| Alignment Length: | 333 | Identity: | 143/333 - (42%) |
|---|---|---|---|
| Similarity: | 213/333 - (63%) | Gaps: | 26/333 - (7%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 4 CYNRGCGQLFDPQTNNDESCRHHPGEPFFHDAYKGWSCCNKKSVDFTEFLNIKGCTLAKHSNVKP 68
Fly 69 PEPEKPVKDESDKDEVIEVRAPIR----------EALPRPPIDSPLTVIQPTVAPALKDMVFAVK 123
Fly 124 TPAA------QKSSDAIEVGTTCKNNGCTYSFTGNSSDFGECTYHPGVPIFHEGMKFWSCCQKRT 182
Fly 183 SDFSQFMAQKGCTYGEHKWVKENDDKKVVQCRYDWHQTATNVVMAIYAKKYDYSQSVIELNPIRL 247
Fly 248 HVNLVFPEQDNARFDLDLELRGIVNVSNASAHMYGTKVEIKLPKLEPGSWSNLNFPNKKLPVVKK 312
Fly 313 SQVEEKKK 320 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CHORD | NP_651226.1 | CHORD | 3..63 | CDD:282781 | 36/58 (62%) |
| CHORD | 138..199 | CDD:282781 | 36/60 (60%) | ||
| p23_melusin_like | 213..301 | CDD:107238 | 31/87 (36%) | ||
| Chordc1 | NP_001101598.1 | Interaction with PPP5C. /evidence=ECO:0000250 | 2..77 | 44/71 (62%) | |
| CHORD | 3..64 | CDD:282781 | 36/58 (62%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 62..82 | 8/19 (42%) | |||
| Interaction with HSP90AA1 and HSP90AB1. /evidence=ECO:0000250 | 65..316 | 99/257 (39%) | |||
| CHORD | 155..216 | CDD:282781 | 36/60 (60%) | ||
| p23_melusin_like | 230..316 | CDD:107238 | 32/92 (35%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 109 | 1.000 | Domainoid score | I6235 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG1667 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H8111 | |
| Inparanoid | 1 | 1.050 | 300 | 1.000 | Inparanoid score | I2615 |
| OMA | 1 | 1.010 | - | - | QHG51840 | |
| OrthoDB | 1 | 1.010 | - | - | D1163528at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0002255 | |
| OrthoInspector | 1 | 1.000 | - | - | otm46023 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_102230 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR12621 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X1489 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 15 | 14.840 | |||||