DRSC/TRiP Functional Genomics Resources

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Protein Alignment mora and Chordc1

DIOPT Version :10

Sequence 1:NP_651226.1 Gene:mora / 42874 FlyBaseID:FBgn0029503 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_001101598.1 Gene:Chordc1 / 315447 RGDID:1304679 Length:331 Species:Rattus norvegicus


Alignment Length:333 Identity:143/333 - (42%)
Similarity:213/333 - (63%) Gaps:26/333 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 CYNRGCGQLFDPQTNNDESCRHHPGEPFFHDAYKGWSCCNKKSVDFTEFLNIKGCTLAKHSNVKP 68
            ||||||||.|||:.|.|::|.:|||.|.||||.||||||.:::.||::||:|.|||..:|::.||
  Rat     5 CYNRGCGQRFDPEANADDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGRHNSEKP 69

  Fly    69 PEPEKPVKDESDKDEVIEVRAPIR----------EALPRPPIDSPLTVIQPTVAPALKDMVFAVK 123
            |||.||....::|.|:.|::...:          ||:.||..|.|:|.::..::.:||..:..:|
  Rat    70 PEPVKPEVKTTEKKELSELKPKFQEHIIQAPKPVEAIKRPSPDEPMTNLELKISASLKQALDKLK 134

  Fly   124 TPAA------QKSSDAIEVGTTCKNNGCTYSFTGNSSDFGECTYHPGVPIFHEGMKFWSCCQKRT 182
            ..:.      ::.||.|::||:|||.||:.::.|..|....|.||.||||||||||:||||:::|
  Rat   135 LSSGNEEDKKEEDSDEIKIGTSCKNGGCSKTYQGLQSLEEVCVYHSGVPIFHEGMKYWSCCRRKT 199

  Fly   183 SDFSQFMAQKGCTYGEHKWVKENDDKKVVQCRYDWHQTATNVVMAIYAKKYDYSQSVIELNPIRL 247
            |||:.|:||:|||.|:|.|.|::..||||.||:|||||...|.:::|||......|.:|.|...|
  Rat   200 SDFNTFLAQEGCTRGKHVWTKKDAGKKVVPCRHDWHQTGGEVTISVYAKNSLPELSQVEANSTLL 264

  Fly   248 HVNLVFPEQDNARFDLDLELRGIVNVSNASAHMYGTKVEIKLPKLEPGSWSNLNFPNKKLPVVKK 312
            :|::||  :....|..:::|.|:::|..:...|..||:||.:.|.||..|::|     :||..||
  Rat   265 NVHIVF--EGEKEFHQNVKLWGVIDVKRSYVTMTATKIEITMRKAEPMQWASL-----ELPTTKK 322

  Fly   313 SQVEEKKK 320
               :||:|
  Rat   323 ---QEKQK 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
moraNP_651226.1 CHORD 3..63 CDD:461502 36/58 (62%)
CHORD 138..199 CDD:461502 36/60 (60%)
p23_melusin_like 213..301 CDD:107238 31/87 (36%)
Chordc1NP_001101598.1 Interaction with PPP5C. /evidence=ECO:0000250 2..77 44/71 (62%)
CHORD 3..64 CDD:461502 36/58 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 62..82 8/19 (42%)
Interaction with HSP90AA1 and HSP90AB1. /evidence=ECO:0000250 65..316 99/257 (39%)
CHORD 155..216 CDD:461502 36/60 (60%)
p23_melusin_like 230..316 CDD:107238 32/92 (35%)

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