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Protein Alignment: SdhD and SHH4
Sequence 1: | NP_651181.1 |
Gene: | SdhD |
FlyBaseID: | FBgn0039112 |
Length: | 182 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_013265.1 |
Gene: | SHH4 |
SGDID: | S000004154 |
Length: | 168 |
Species: | Saccharomyces cerevisiae |
Alignment Length: | 136 |
Identity: | 37/137 (27%) |
Similarity: | 62/137 (45%) |
Gaps: | 15/137 (11%) |
Fly 52 VAPVVREISVSAPRMASAGSSHTLLWTVERIVSAGLLAVI--PAAFIAP-SQVLDALMAISVVIH 113
|:....:.|...|...:.||.| |.|||.:|..:|.:| |.....| |...|..:::.::.|
Yeast 39 VSGTANDSSYMPPESRAQGSYH---WIVERGLSLAVLPLIAVPLVTTGPISTFTDTFLSLVLLGH 100
Fly 114 THWGVEAMVVDYMRPSVVGNVLPKVAHIALIIISVA---TLGGLFYFIQNDVGLANGIKRFWAIK 175
.|.|.::.::||:...|.| ||.|.|:.::|:. :..|::.....:.||...:|..| .
Yeast 101 CHIGFQSCIIDYISERVYG----KVHHYAMYLLSLGSFLSFVGIYKLESQEAGLIASLKSLW--D 159
Fly 176 GKDAEK 181
.|..||
Yeast 160 NKPVEK 165
|
Known Domains:
Gene | Sequence | Domain | Region |
External ID | Identity |
SdhD | NP_651181.1 |
CybS |
45..173 |
CDD:283083 |
34/127 (27%) |
SHH4 | NP_013265.1 |
CybS |
26..159 |
CDD:310143 |
34/129 (26%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
|
|
|
E1_KOG4097 |
Hieranoid |
1 |
1.000 |
|
|
|
|
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
48 |
1.000 |
Inparanoid score |
I1837 |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
|
|
|
FOG0002475 |
OrthoInspector |
1 |
1.000 |
|
|
|
T1136261 |
orthoMCL |
1 |
0.900 |
|
|
|
OOG5_129488 |
Panther |
1 |
1.100 |
|
|
O |
PTHR13337 |
Phylome |
1 |
0.910 |
|
0.964 |
Consistency score |
|
RoundUp |
1 |
1.030 |
|
avgDist |
Average_Evolutionary_Distance |
R310 |
TreeFam |
1 |
0.960 |
|
|
|
|
|
10 | 9.850 |
|
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