Protein Alignment SdhD and Sdhd

DIOPT Version :9

• Sequence 1: NP_651181.1
• Gene: SdhD / 42808
• FlyBaseID: FBgn0039112
• Length: 182
• Species: Drosophila melanogaster
• Sequence 2: NP_942083.1
• Gene: Sdhd / 363061
• RGDID: 735231
• Length: 159
• Species: Rattus norvegicus
• Alignment Length: 175
• Identity: 56/175 - (32%)
• Similarity: 86/175 - (49%)
• Gaps: 19/175 - (10%)

  Fly     3 LSLLLRGAVRCNAANLVKSARITPLKSYSTLVANVQRKAVVQPLAVAKIVAPVVR---EISVSAP 64
            :::||:..|.|:.    :.||...|:|.:...|.|......||       .|..|   .|.:| |
  Rat     1 MAVLLKLGVLCSG----QGARALSLRSRAVRPAFVSAFLQDQP-------TPGWRGTQHIHLS-P 53

  Fly    65 RMASAGSSHTLLWTVERIVSAGLLAVIPAAFIAPSQVLDALMAISVVIHTHWGVEAMVVDYMRPS 129
            ...|...:.:|.||.||:||..||.:|||.::.|..|:|..:|.::.:|:|||:..:|.||
  Rat    54 SHQSGSKAASLHWTSERVVSVLLLGLIPAGYLNPCSVVDYSLAAALTLHSHWGIGQVVTDY---- 114

  Fly   130 VVGNVLPKVAHIALIIISVATLGGLFYFIQNDVGLANGIKRFWAI 174
            |.|:.|.|.....|:.:|..|..||.||..:|||:...:...|.:
  Rat   115 VHGDALQKATKAGLLAVSALTFAGLCYFNYHDVGICRAVAMLWKL 159

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SdhD	NP_651181.1	CybS	45..173	CDD:283083	44/130 (34%)
Sdhd	NP_942083.1	SQR_TypeC_CybS	60..158	CDD:239576	37/101 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166343976
Domainoid	1	1.000	83	1.000	Domainoid score	I8170
eggNOG	1	0.900	-	-		E1_KOG4097
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	84	1.000	Inparanoid score	I5082
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1511215at2759
OrthoFinder	1	1.000	-	-		FOG0006285
OrthoInspector	1	1.000	-	-		oto98214
orthoMCL	1	0.900	-	-		OOG6_103841
Panther	1	1.100	-	-	LDO	PTHR13337
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X5239
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	12	11.800