DRSC/TRiP Functional Genomics Resources

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Protein Alignment: SdhD and sdh4

Sequence 1:NP_651181.1 Gene:SdhD FlyBaseID:FBgn0039112 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_595828.2 Gene:sdh4 PomBaseID:SPBP23A10.16 Length:159 Species:Schizosaccharomyces pombe

Alignment Length:158 Identity:48/159 (30%)
Similarity:73/159 (46%) Gaps:32/159 (20%)


  Fly    27 LKSYSTLVANVQRKAVVQPLAVAKIVAP-------VVREISVSAPRMASAGSSHTLLWTVERIVS 84
            :||:||             .:||||..|       .|.:.:|........||.|   |..|||::
pombe    20 VKSFST-------------TSVAKIFPPPPQTIKGTVNDAAVFPHHSKLHGSYH---WDFERIIA 68

  Fly    85 AGLLAVIPAAFI-----APSQVLDALMAISVVIHTHWGVEAMVVDYMRPSVVGNVLPKVAHIALI 144
               :|::|...|     ....::||.:|.:::.|.|.|.|:.|:||. |:.....|..:.|..|.
pombe    69 ---IAMVPQVMIPLFTGTSHPLMDAALACTLITHAHLGFESCVIDYF-PARRFKKLSPLMHWILR 129

  Fly   145 IISVATLGGLFYFIQNDVGLANGIKRFW 172
            ..:|.||.|::.|..||:||..|||:.|
pombe   130 GCTVLTLIGVYEFNTNDIGLTEGIKKLW 157

Known Domains:


GeneSequenceDomainRegion External IDIdentity
SdhDNP_651181.1 CybS 45..173 CDD:283083 44/141 (31%)
sdh4NP_595828.2 CybS 26..158 CDD:283083 44/140 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Hieranoid 1 1.000
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 61 1.000 Inparanoid score I1964
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 FOG0002475
OrthoInspector 1 1.000 T1125136
orthoMCL 1 0.900 OOG5_129488
Panther 1 1.100 LDO PTHR13337
Phylome 1 0.910 0.977 Consistency score
RoundUp 1 1.030 avgDist Average_Evolutionary_Distance R310
TreeFam 1 0.960
98.950

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