DRSC/TRiP Functional Genomics Resources

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Protein Alignment GILT2 and ifi30a

DIOPT Version :10

Sequence 1:NP_651166.1 Gene:GILT2 / 42788 FlyBaseID:FBgn0039099 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_001006057.1 Gene:ifi30a / 336503 ZFINID:ZDB-GENE-030131-8447 Length:255 Species:Danio rerio


Alignment Length:197 Identity:59/197 - (29%)
Similarity:94/197 - (47%) Gaps:22/197 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 ADRLAITLYYEALCPYCMEFVTTQLNPSMVR-QDRLPFTDLTLVPYGNAR-TNDDGN--VECQHG 87
            ||::.::||||:|||.|..|:|:||.|:::. ||   ..::.|||||||: |...|.  ..||||
Zfish    59 ADKVKVSLYYESLCPGCRMFLTSQLVPTLIMLQD---IMEIDLVPYGNAQETQAQGKYIFTCQHG 120

  Fly    88 VMECELNAWHACILEHHDIAQSLKLIACMMRGKK--NRLEKCADHYQIDV--GDVKNCKKTRQVN 148
            ..||..|....|:|....: .::.:|.||..|..  ...:.|...|:.||  ..:..|.|..|.|
Zfish   121 EDECLGNMIETCMLNKLGL-DAVMVIFCMESGNDVLKSAQPCLGVYRPDVTWDSIMQCVKGDQGN 184

  Fly   149 DILRKYGKETAKVS--FQGVPAVALDNVYNADLSANLTDHFDAIFCAKYKEK--------FNKQL 203
            .::.:...:|..::  .|.||.:.::..:..||.........::.|:.||.:        ..|..
Zfish   185 KLMHENAVKTDALNPPHQYVPWITVNGEHTDDLQDKAMGSLFSLVCSLYKGQKPAACTLGLKKNT 249

  Fly   204 NN 205
            ||
Zfish   250 NN 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GILT2NP_651166.1 GILT 33..128 CDD:460853 37/100 (37%)
ifi30aNP_001006057.1 SapA 27..53 CDD:470592
GILT 65..162 CDD:460853 37/100 (37%)
Blue background indicates that the domain is not in the aligned region.

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