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Protein Alignment GILT2 and Y18D10A.2
DIOPT Version :9
| Sequence 1: | NP_651166.1 |
Gene: | GILT2 / 42788 |
FlyBaseID: | FBgn0039099 |
Length: | 207 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_493240.2 |
Gene: | Y18D10A.2 / 189471 |
WormBaseID: | WBGene00012475 |
Length: | 212 |
Species: | Caenorhabditis elegans |
| Alignment Length: | 173 |
Identity: | 43/173 - (24%) |
| Similarity: | 66/173 - (38%) |
Gaps: | 21/173 - (12%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 40 CPYCMEFVTTQLNPSMVR-----QDRLPFTDLTLVPYGNARTNDDGNVECQHGVMECELNAWHAC 99
||...:|:..||.|.... .|.|.. |...||.|..:.:......|.||.:||.||....|
Worm 47 CPDTSKFIHNQLVPFYQNYKGNLSDGLKL-DFHAVPTGGHQVDGKYVNRCLHGALECALNKLQMC 110
Fly 100 ILEHHDIAQSLKLIACMMRGKK--NRLEKCADHYQIDVGD-VKNCKKTRQVNDIL---RKYGKET 158
..:| |.|...:.|..::||. :...||.. ..:.|. |:||.::.:...:| ..|....
Worm 111 SKKH--IKQDWLVTAGCIQGKTAYSAGLKCLP--DTEEGKIVQNCAESEEGEYLLNDENSYRYNV 171
Fly 159 AKVSFQGVPAVALDNVYNADLSANLTDHFDAIFCAKYKEKFNK 201
|..| ..:|.:.::...|.:....|.| :.|.....|.|:
Worm 172 APHS-AWLPWIQVNGERNRNAEFKLKD----VICQLESMKGNE 209
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| GILT2 | NP_651166.1 |
GILT |
33..128 |
CDD:460853 |
27/94 (29%) |
| Y18D10A.2 | NP_493240.2 |
GILT |
40..139 |
CDD:460853 |
27/94 (29%) |
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
1 |
0.930 |
- |
- |
|
|
| Domainoid |
0 | 0.000 |
Not matched by this tool. |
| eggNOG |
1 |
0.900 |
- |
- |
|
|
| Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Software error:
Can't use an undefined value as an ARRAY reference at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 1034.
For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message
and the time and date of the error.
