DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-IV and beat-IIb

DIOPT Version :10

Sequence 1:NP_001262876.1 Gene:beat-IV / 42778 FlyBaseID:FBgn0039089 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_650613.2 Gene:beat-IIb / 42082 FlyBaseID:FBgn0038494 Length:407 Species:Drosophila melanogaster


Alignment Length:168 Identity:55/168 - (32%)
Similarity:91/168 - (54%) Gaps:11/168 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 LYAIKWYKDNEEFYRYVPKARPPKTSYRVDGVRVIEELSDASRVLLRGLTLNSTGLYRCEVSAEA 275
            ||:||:|:...|||||.|...||...::..|:||.|..|:|:.||:|.::...:|.:.|||:|:|
  Fly   127 LYSIKFYRGQMEFYRYTPGEYPPTKVFQFPGIRVDENGSNATTVLIRNVSFGLSGQFSCEVTADA 191

  Fly   276 PNFSSVQGEGRMDIVFLPRDGPHIRGQQYQYQIGEYLYLNCTSGKSHPASHLQWFVNEQPIL--- 337
            |.:|:.....:|.:|..|...|.:..:..:|:.|:.|..||::..|.|.:.|::.:|..|:.   
  Fly   192 PLYSTATAFAQMQVVEFPEKRPQLFTEHSRYEPGDVLRANCSTLPSRPRADLRFTINNIPVSIPF 256

  Fly   338 --DEHYLHKYNDIVHKHGLITSTLGLQLPLEPRHFHEG 373
              :..|:...:      .||.|.|.|:|.|:..||..|
  Fly   257 TEETQYIRTVD------SLIASRLSLKLQLQATHFVAG 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-IVNP_001262876.1 V-set <210..271 CDD:462230 24/59 (41%)
Ig 297..>362 CDD:472250 16/69 (23%)
Ig strand B 312..316 CDD:409353 1/3 (33%)
Ig strand C 326..330 CDD:409353 1/3 (33%)
Ig strand E 357..361 CDD:409353 2/3 (67%)
beat-IIbNP_650613.2 IG_like 108..198 CDD:214653 30/70 (43%)

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