DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-IV and beat-Vc

DIOPT Version :9

Sequence 1:NP_001262876.1 Gene:beat-IV / 42778 FlyBaseID:FBgn0039089 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_001356887.1 Gene:beat-Vc / 41575 FlyBaseID:FBgn0038084 Length:297 Species:Drosophila melanogaster


Alignment Length:248 Identity:74/248 - (29%)
Similarity:109/248 - (43%) Gaps:56/248 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 LYAIKWYKDNEEFYRYVPKARPPKTSYRVDGVRVIEELSDAS--------RVLLRGLTLNSTGLY 267
            |.::|||||..||:||.|...|....:.|.||.:    :|.|        .|.|..||.:|:|.|
  Fly    56 LNSVKWYKDGLEFFRYSPLTPPTTNWFPVKGVTI----ADGSPHCNQFICNVELEKLTAHSSGQY 116

  Fly   268 RCEVSAEAPNFSSVQGEGRMDIVFLPRDGPHIRGQQYQYQIGEYLYLNCTSGKSHPASHLQWFVN 332
            |||||.:||.|..:.....|.:..||:..|.|.|.::.|:..:||..||::..|.|.:.|.|::|
  Fly   117 RCEVSGDAPEFKLIDQTANMTVGVLPKFDPFISGVRHAYKYHDYLEANCSTEMSSPMAKLTWYIN 181

  Fly   333 E--------QPILDEHYLHKYNDIVHKHGLITSTLGLQLPLEPRHF-HEGDM-RVKCLASISPVL 387
            .        ||.::|  :.:..|..|   |..|.|.|:|.|:.:.| .:.:| .::|.|.|    
  Fly   182 NKTAPGHSLQPQINE--VSRNVDGFH---LFASHLHLRLHLDDQRFISKSEMLELRCTADI---- 237

  Fly   388 WKGGKESVLQRRPGIIDNREAMLLVKGAAGHSESSFLRTLTIAIILARTGQWL 440
                                     .|.|.....|.:||..:|:..|.|.|.|
  Fly   238 -------------------------MGLAAVRRESRVRTTILALRDAGTKQRL 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-IVNP_001262876.1 Ig <212..285 CDD:299845 31/80 (39%)
Ig 314..>362 CDD:299845 15/55 (27%)
beat-VcNP_001356887.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21261
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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