DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17111 and nompA

DIOPT Version :10

Sequence 1:NP_651119.2 Gene:CG17111 / 42727 FlyBaseID:FBgn0039048 Length:792 Species:Drosophila melanogaster
Sequence 2:NP_524831.2 Gene:nompA / 45587 FlyBaseID:FBgn0016047 Length:1557 Species:Drosophila melanogaster


Alignment Length:677 Identity:148/677 - (21%)
Similarity:221/677 - (32%) Gaps:237/677 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 ECAERCFFETQFRCLSASF---APSYRNNRERFRGEAGPGQRPSPRLGRCMLSDRDKTV----QP 238
            :|...|.....|.|.|.::   |.|...:|:|.|      .|.||   .|.|||||...    .|
  Fly   942 QCERECIESRDFVCRSFNYRDSAASGYEDRDRDR------DRDSP---NCELSDRDSRELDIHDP 997

  Fly   239 DAFRAAPYDEEYMENQCHERAIESDNCSYELYANSSFIYAEARYLGLSQKECQAMCSHEAKFYCQ 303
            ..|.|:.||                  .||            |.:|.|..|              
  Fly   998 GTFDASNYD------------------FYE------------RSIGRSDGE-------------- 1018

  Fly   304 GVSFYYVNQLSLSECLLHSEDIVSLGPRSLKLRENSVYMRRVKCLDVRVFCTRDEMTIKYNPKDW 368
                                                       |:||...|..:.|.......:.
  Fly  1019 -------------------------------------------CMDVTQTCNEEGMEFTIRTPEG 1040

  Fly   369 FVGKIYASMHSKDCLARGSGNGSVLLTLQIGSEVKENRCGILRAYEMTQEYQRTFISALVVIQNN 433
            |:|:||.......|..|  |||..:..|::........||       ||.|..| ::.:||:|.:
  Fly  1041 FLGRIYTYGFYDRCFFR--GNGGTVNVLRLSGPQGYPDCG-------TQRYGDT-LTNIVVVQFS 1095

  Fly   434 PNVQTQGDRLIKVGCI---QSNATTSLGVSVRDSSVDSSEPVPSAIALESSLEYTEHMFPHEGVV 495
            .||||..|:...:.||   ...|..|.|.    ....|..|:|        :||    .|.|..:
  Fly  1096 DNVQTSRDKRYNLTCIFRGPGEAVVSSGY----IGAGSGSPIP--------IEY----LPAENTL 1144

  Fly   496 HYNSSTGPHPHPSISLQILDLSHQHETNDVQIGQNLELQIVAEYSPQQLAEHMELQLAPLPDFRA 560
                        |..:::..|.....|..:.:|..|..::.|    |....|       :.|..|
  Fly  1145 ------------SSKVRLSILYQGRPTTTIAVGDPLTFRLEA----QDGYNH-------VTDIFA 1186

  Fly   561 TSLVAKTADNENFVLLIDERGCPTDASVFPALERVHTASRSMLRARFHAFKFSGTANVSFDVKIR 625
            |::||:...:...:.|||..|||.|..|||.|:::...  ..|.|||:|||...:..:.|:..:|
  Fly  1187 TNVVARDPYSGRSIQLIDRFGCPVDPFVFPELDKLRDG--DTLEARFNAFKIPESNFLVFEATVR 1249

  Fly   626 FCVERCSPSNC------ISSSWQRRRRQADQPD-RRPE----------------DLRVQNPVYIS 667
            .|.|.|.|:.|      ...|:.||||..:..: ..||                ::.|.|...:|
  Fly  1250 SCREGCQPAYCPGPAGRQEPSFGRRRRSLNTTEIPEPEALALEGSSQLEASTLDEVTVVNSTTVS 1314

  Fly   668 TVVDVAP----QPDNFTRSQEELPLNYNIRVHGPDQSNTNSYLYGERGVL--------LIAGIDD 720
            ..:...|    |....|:..||           |:|......::..|..:        |:|.:  
  Fly  1315 ATLGQVPLNETQLGEKTKETEE-----------PEQVREMIEVFETREEIEKESYPRKLVAPV-- 1366

  Fly   721 PLHLDNVCIN----QSLLIALFIFW-LICQVALLFGCGMVLQRYRRLAKLEDERR---------- 770
                :.||:.    ..|:.|:.:.. |:..:.|:.|.|     |||..|...:.|          
  Fly  1367 ----ETVCMTPAEYHGLITAIILLMILLFSITLVAGLG-----YRRYWKSISKNRLVDRHSPIHS 1422

  Fly   771 --------RLHEEYLEARRVHWADQGG 789
                    |.||.:.|...:...:.||
  Fly  1423 LGHSHSSIRTHERFTEIGHMPNLNGGG 1449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17111NP_651119.2 PAN_1 159..255 CDD:459635 24/80 (30%)
PAN_AP_HGF 270..344 CDD:238532 4/73 (5%)
ZP <566..627 CDD:214579 20/60 (33%)
nompANP_524831.2 PAN_AP_HGF 150..231 CDD:238532
PAN_AP_HGF 244..>303 CDD:238532
PAN_AP_HGF 349..424 CDD:238532
PHA03247 <579..907 CDD:223021
PAN_AP_HGF 914..1011 CDD:238532 26/107 (24%)
ZP 1025..1264 CDD:214579 76/289 (26%)
Blue background indicates that the domain is not in the aligned region.

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