DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17111 and m

DIOPT Version :10

Sequence 1:NP_651119.2 Gene:CG17111 / 42727 FlyBaseID:FBgn0039048 Length:792 Species:Drosophila melanogaster
Sequence 2:NP_572747.1 Gene:m / 44835 FlyBaseID:FBgn0002577 Length:682 Species:Drosophila melanogaster


Alignment Length:331 Identity:72/331 - (21%)
Similarity:110/331 - (33%) Gaps:66/331 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   313 LSLSEC--LLHSEDIVSLGPRSLKLRENSVYMRRVKCLDVRVFCTRDEMTIKYNPKDWFVGKIYA 375
            |..|.|  :||....:.:....|...|....|..:..|:  |.|.:|.|.:.......|.|.:.:
  Fly    14 LRFSSCIFILHLMFSLVIAGNELWPMERPDGMPNIVSLE--VMCGKDHMDVHLTFSHPFEGIVSS 76

  Fly   376 SMHSKD--CLARGSGNGSVLLTLQIGSEVKENRCGILRAYEMTQEYQRTFISALVVIQNNPNVQT 438
            .....|  |:......|....:.:|    ..:|||      ...:....|....||:|.:.::..
  Fly    77 KGQHSDPRCVYVPPSTGKTFFSFRI----SYSRCG------TKPDLNGQFYENTVVVQYDKDLLE 131

  Fly   439 QGDRLIKVGCIQSNATTSLGVSVRDSSVDSSEPVPSAIALESSLEYTEHMFPHEGV---VHYNSS 500
            ..|...::.|...|          |....:|:| |..||   .|:..:..|..:.|   :.....
  Fly   132 VWDEAKRLRCEWFN----------DYEKTASKP-PMVIA---DLDVIQLDFRGDNVDCWMEIQHG 182

  Fly   501 TGPHPHPSISLQILDLSHQHETNDVQIGQNLELQI-VAEYSPQQLAEHMELQLAPLPDFRATSLV 564
            .||...|...:             |.:|..|.|.: :.:|..:.             |.|..|.|
  Fly   183 KGPWAPPVSGI-------------VPLGSTLTLVVAINDYRGEF-------------DMRVKSCV 221

  Fly   565 AKTADNENFVL-LIDERGC---PTDASVFPALERVHTASRSMLRARFHAFKFSGTANVSFDVKIR 625
            |  :|....|: |.||.||   |...|.|.........:..:..|.||||||....:|....|:.
  Fly   222 A--SDGSGHVINLSDEFGCVLRPKMISRFLKARAPDERATVITYAFFHAFKFPDALSVHIKCKVE 284

  Fly   626 FCVERC 631
            .|...|
  Fly   285 ICRHGC 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17111NP_651119.2 PAN_1 159..255 CDD:459635
PAN_AP_HGF 270..344 CDD:238532 8/32 (25%)
ZP <566..627 CDD:214579 19/64 (30%)
mNP_572747.1 ZP 55..286 CDD:214579 60/282 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.