DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG17111 and notch3

Sequence 1:NP_651119.2 Gene:CG17111 FlyBaseID:FBgn0039048 Length:792 Species:Drosophila melanogaster
Sequence 2:XP_017948007.1 Gene:notch3 XenbaseID:XB-GENE-6450008 Length:2413 Species:Xenopus tropicalis

Alignment Length:295 Identity:60/296 (20%)
Similarity:102/296 (34%) Gaps:85/296 (29%)


  Fly   447 GCIQSNATTSLGVSVRDSSVDSSEPVPSAIALESSLEYTEH----MFPHEGVVHYNSSTGPHPHP 507
            |.::|:.|.|              ||.|   |:|...|:.:    :.|..|..:..|.:.|.. |
 Frog  2117 GLLESSVTLS--------------PVDS---LDSPRAYSANPGSPVMPVPGTFNLGSMSVPST-P 2163

  Fly   508 SISLQI-----LDLSHQHETNDVQIGQNLELQIVAEYSPQQLAEHMELQLAPLPDFRATSLVAKT 567
            .::..:     :.|:..:|..::|.|..:.||                  ..:|..||.|.|...
 Frog  2164 LVNGLMEGPFAVSLARLNELGEIQGGGMMALQ------------------GRVPLQRAPSCVVNG 2210

  Fly   568 AD----NENFVLLIDERGCPTD-----------ASVFPALERVHTASRSMLRARFHAFKFSGTAN 617
            .:    |.|.:..|.:.|.||.           |:..|.|.::|.....||:   :.........
 Frog  2211 LNLGMVNTNAMPFIWQTGVPTSHPHRNVMTGAPAASVPNLHQLHAQQVLMLQ---NQMAMQSPVK 2272

  Fly   618 VSFDVKIRFCVERCSPSNCISSSWQRRRRQADQP-----------DRRPEDLRVQNPVYISTVVD 671
            ::.|.:.:......:|.:....|......::.||           ...|.|:.:|....:|    
 Frog  2273 MAMDQQCQMVSMPPNPVHMRQQSMPHVAERSVQPLTPTEGSYFKQQSVPNDVTMQTSPAMS---- 2333

  Fly   672 VAPQPDNFTRSQEELPLNYNIRVHGPDQSNTNSYL 706
             ||....|..|||:.|.:|   :|.|   |.:.||
 Frog  2334 -APPQQTFAPSQEDTPKHY---LHIP---NEHPYL 2361

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG17111NP_651119.2 PAN_1 159..255 CDD:278453
PAN_AP_HGF 270..344 CDD:238532
notch3XP_017948007.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 FOG0000109
OrthoInspector 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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