DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or94b and Or42a

DIOPT Version :10

Sequence 1:NP_524456.1 Gene:Or94b / 42712 FlyBaseID:FBgn0039034 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster


Alignment Length:409 Identity:84/409 - (20%)
Similarity:170/409 - (41%) Gaps:59/409 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 IQRWIGLLKWENE-----GEDGVLTWLKRIYPFVLHLPLTFTYIA-LMWYEAIT-SSDFEE---- 69
            ::||...|..:::     ..|..|..|:.::...:..|....::| ::|..|:. .|.|.:    
  Fly     3 LRRWFPTLYTQSKDSPVRSRDATLYLLRCVFLMGVRKPPAKFFVAYVLWSFALNFCSTFYQPIGF 67

  Fly    70 -AGQVLYMS-------ITELALV-------TKLLNIW---YRRHEAASLIHELQH---DPAFNLR 113
             .|.:.::|       :|.|.:.       ||:|.:|   .|..||.:|:.|:..   ||...|:
  Fly    68 LTGYISHLSEFSPGEFLTSLQVAFNAWSCSTKVLIVWALVKRFDEANNLLDEMDRRITDPGERLQ 132

  Fly   114 NSEEIKFWQQNQRNFKRIFYWYIWGSLFVAVMGYISVFFQEDYELPFGYYVPF-EWRTRERYF-Y 176
            ....:..       ..|||::::...:..|...::|..|..  ..|:..|.|| :||:...:. .
  Fly   133 IHRAVSL-------SNRIFFFFMAVYMVYATNTFLSAIFIG--RPPYQNYYPFLDWRSSTLHLAL 188

  Fly   177 AWGYNVVAMTLCCLSNILLDTLGCY---FMFHIASLFRLLGMRLEALKNAAEEKARPELRRIFQL 238
            ..|....||...|..::.:|   ||   |:..:.:...:...||..|.....|....:..|:.|.
  Fly   189 QAGLEYFAMAGACFQDVCVD---CYPVNFVLVLRAHMSIFAERLRRLGTYPYESQEQKYERLVQC 250

  Fly   239 ---HTKVRRLTRECEVLVSPYVLSQVVFSAFII--CFSAYRLVHMGFKQRPGLFVTTVQFVAVMI 298
               |..:.|.. :|   :.| |:|..:|..|::  ....:.|:::......|..:..:.|:|.::
  Fly   251 IQDHKVILRFV-DC---LRP-VISGTIFVQFLVVGLVLGFTLINIVLFANLGSAIAALSFMAAVL 310

  Fly   299 VQIFLPCYYGNELTFHANALTNSVFGTNWLEYSVGTRKLLNCYMEFLKRPVKVRAGVFFEIGLPI 363
            ::....|...|.||.....|.:::|.:||::.....:|.|..:::.|::|:...|...|.|.:..
  Fly   311 LETTPFCILCNYLTEDCYKLADALFQSNWIDEEKRYQKTLMYFLQKLQQPITFMAMNVFPISVGT 375

  Fly   364 FVKTINNAYSFFALLLKIS 382
            .:.....::|.|.|:.:::
  Fly   376 NISVTKFSFSVFTLVKQMN 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or94bNP_524456.1 7tm_6 66..372 CDD:251636 70/340 (21%)
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 67/321 (21%)

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