DRSC/TRiP Functional Genomics Resources

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Protein Alignment klg and Lsamp

DIOPT Version :10

Sequence 1:NP_524454.2 Gene:klg / 42707 FlyBaseID:FBgn0017590 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001401926.1 Gene:Lsamp / 29561 RGDID:71102 Length:378 Species:Rattus norvegicus


Alignment Length:337 Identity:90/337 - (26%)
Similarity:143/337 - (42%) Gaps:57/337 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 NRAPLQMN-CPILIVISLGWLLHAHAGSGGFAVEAAISNRGSNSRSMSNVQQSAVAASTLTATLP 101
            |:.|.::| .||.|              .|..|.:...|||:::   ..|:|             
  Rat    28 NQPPAEVNLSPITI--------------PGLPVRSVDFNRGTDN---ITVRQ------------- 62

  Fly   102 RFLSRGHTYRAVVGDTLVLPCQVENLGNFVLLWRRGTNVLTASNIMVTRDERVRLID----GYNL 162
                         |||.:|.|.||: .|..:.|...:.::.|.:...:.|.||.|..    .|:|
  Rat    63 -------------GDTAILRCVVED-KNSKVAWLNRSGIIFAGHDKWSLDPRVELEKRHALEYSL 113

  Fly   163 EISDLEPQDAGDYVC--QISDKINRDQVHTVEILVPPSVRAIPTSGQLQARKGGPITLECKGSGN 225
            .|..::..|.|.|.|  |...:....||:.: :.|||.:..|  |..:...:|..:||.|..:|.
  Rat   114 RIQKVDVYDEGSYTCSVQTQHEPKTSQVYLI-VQVPPKISNI--SSDVTVNEGSNVTLVCMANGR 175

  Fly   226 PVPSIYWTKKSGANKSTARIGDGPILTLEKLERQQAGVYQCTADNGVGDPVTVDMRLDVLYPPDI 290
            |.|.|.|...:...:...  |:...|.:..:.|:|:|.|:|.|.|.|.......:::.|.|||.|
  Rat   176 PEPVITWRHLTPLGREFE--GEEEYLEILGITREQSGKYECKAANEVSSADVKQVKVTVNYPPTI 238

  Fly   291 QVEKSWIHSGEGFEAKLVCIVFADPVATVSWYQNSFPIQSTDRRIMATRANRHMLTIRHIQQEDF 355
            ...|| ..:..|.:|.|.|...|.|.....||::...|.|.:...:.:...:..||:.::.:|.:
  Rat   239 TESKS-NEATTGRQASLKCEASAVPAPDFEWYRDDTRINSANGLEIKSTEGQSSLTVTNVTEEHY 302

  Fly   356 GNYSCVADNSLG 367
            |||:|||.|.||
  Rat   303 GNYTCVAANKLG 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klgNP_524454.2 IG_like 109..195 CDD:214653 24/91 (26%)
Ig strand B 118..122 CDD:409353 1/3 (33%)
Ig strand C 131..135 CDD:409353 0/3 (0%)
Ig strand E 160..164 CDD:409353 2/3 (67%)
Ig strand F 174..179 CDD:409353 2/6 (33%)
Ig strand G 188..191 CDD:409353 1/2 (50%)
Ig_3 196..270 CDD:464046 21/73 (29%)
Ig_3 287..364 CDD:464046 24/76 (32%)
FN3 392..486 CDD:238020
LsampNP_001401926.1 Ig 55..145 CDD:472250 26/120 (22%)
Ig strand B 66..70 CDD:409382 1/3 (33%)
Ig strand C 78..82 CDD:409382 0/3 (0%)
Ig strand E 111..115 CDD:409382 2/3 (67%)
Ig strand F 125..130 CDD:409382 2/4 (50%)
Ig strand G 138..141 CDD:409382 0/2 (0%)
Ig_3 148..218 CDD:464046 21/73 (29%)
Ig_3 235..311 CDD:464046 24/76 (32%)
Blue background indicates that the domain is not in the aligned region.

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