DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment klg and ntm

DIOPT Version :9

Sequence 1:NP_524454.2 Gene:klg / 42707 FlyBaseID:FBgn0017590 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_004916061.1 Gene:ntm / 100492453 XenbaseID:XB-GENE-6045425 Length:374 Species:Xenopus tropicalis


Alignment Length:262 Identity:76/262 - (29%)
Similarity:127/262 - (48%) Gaps:14/262 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 GDTLVLPCQVENLGNFVLLWRRGTNVLTASNIMVTRDERVRLI----DGYNLEISDLEPQDAGDY 175
            ||:.:|.|.|:|....| .|...:.:|...|...:.|.||.|:    ..|::||.:::..|.|.|
 Frog    51 GDSAILRCTVDNRVTRV-AWLNRSTILYTGNDKWSIDPRVVLLANTKSQYSIEIQNVDIYDEGPY 114

  Fly   176 VC--QISDKINRDQVHTVEILVPPSVRAIPTSGQLQARKGGPITLECKGSGNPVPSIYWTKKSGA 238
            .|  |..:.....:||.: :.|||  |.:..|..:...:|..::|.|..:|.|.|.:.|...|  
 Frog   115 TCSVQTDNHPKTSRVHLI-V
QVPP--RIVDISSSIAVNEGSNVSLICIANGRPEPVVNWRYLS-- 174

  Fly   239 NKSTARIGDGPILTLEKLERQQAGVYQCTADNGVGDPVTVDMRLDVLYPPDIQVEKSWIHSGEGF 303
            .|:...:.:...|.:..:.|:|:|:|:|:|.|.|..|....::|.|.|||.| ::...|.:..|.
 Frog   175 PKARGFVSEDEYLEITGITREQSGIYECSASNDVSAPDVRRVKLTV
NYPPYI-LDAQNIGAPLGH 238

  Fly   304 EAKLVCIVFADPVATVSWYQNSFPIQSTDRRI-MATRANRHMLTIRHIQQEDFGNYSCVADNSLG 367
            ...|.|...|.|.|...||:....:..:.|.: :..|.....:|..::.::|:|||:|:|.|.||
 Frog   239 RGILQCEASAVPAADFFWYKEDKRLSDSWRGVKVENRETISRVTFLNVSEQDYGNYTCMAKNLLG 303

  Fly   368 RS 369
            .|
 Frog   304 HS 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klgNP_524454.2 DUF1370 63..>124 CDD:284518 4/8 (50%)
IG_like 109..195 CDD:214653 24/85 (28%)
Ig 118..191 CDD:143165 22/78 (28%)
IG_like 205..274 CDD:214653 19/68 (28%)
IGc2 213..273 CDD:197706 17/59 (29%)
IGc2 301..367 CDD:197706 18/66 (27%)
FN3 392..486 CDD:238020
ntmXP_004916061.1 Ig 45..133 CDD:299845 24/83 (29%)
IG_like 45..133 CDD:214653 24/83 (29%)
IG_like 143..220 CDD:214653 21/78 (27%)
IGc2 150..209 CDD:197706 17/60 (28%)
ig 227..311 CDD:278476 22/79 (28%)
IG_like 230..311 CDD:214653 22/76 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X97
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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