DRSC/TRiP Functional Genomics Resources

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Protein Alignment klg and lsamp

DIOPT Version :10

Sequence 1:NP_524454.2 Gene:klg / 42707 FlyBaseID:FBgn0017590 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_031751462.1 Gene:lsamp / 100124984 XenbaseID:XB-GENE-5759171 Length:368 Species:Xenopus tropicalis


Alignment Length:352 Identity:97/352 - (27%)
Similarity:152/352 - (43%) Gaps:66/352 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 KSSQRRNRAPLQMNCPILIVISLGWLLHAHAGSGGFAVEAAISNRGSNSRSMSNVQQSAVAASTL 96
            :|...||:.|       |:::.|..||..     |..|.:     |..:||..|:          
 Frog     4 RSQADRNQLP-------LLLLRLLCLLPT-----GLPVRS-----GDFNRSTDNI---------- 41

  Fly    97 TATLPRFLSRGHTYRAVVGDTLVLPCQVENLGNFVLLWRRGTNVLTASNIMVTRDERVRL----I 157
                        |.|.  |||.:|.|.||:..:.| .|...:.::.|.:...:.|.||.|    :
 Frog    42 ------------TVRQ--GDTAILRCFVEDRSSRV-AWLNRSGIIFAGDDKWSLDPRVELEKRSL 91

  Fly   158 DGYNLEISDLEPQDAGDYVCQISDK--INRDQVHTVEILVPPSVRAIPTSGQLQARKGGPITLEC 220
            ..|:|.|..::..|.|.|.|.:..|  ....||:.: :.|||.:..|  |..:...:|..:||.|
 Frog    92 LEYSLRIQKVDVSDEGPYTCSVQTKQHTKTTQVYLI-VQVPPKISNI--SADITVNEGSNVTLMC 153

  Fly   221 KGSGNPVPSIYW---TKKSGANKSTARIGDGPILTLEKLERQQAGVYQCTADNGVGDPVTVDMRL 282
            ...|.|.|.|.|   |..:|.:.:....|:...|.::.:.|:|:|.|:|.|.|.|.......:|:
 Frog   154 IAYGRPEPMITWRHLTPTAGTSPARDFEGEEEFLEIQGITREQSGRYECKAANEVASADVKQVRV 218

  Fly   283 DVLYPPDIQVEKSWIHSGEGFEAKLVCIVFADPVATVSWYQNSFPIQSTDRRIMATR-------A 340
            .|.|||.|...|| ..:..|.:|.|.|...|.|.....||::    .:..|||.:.:       .
 Frog   219 TVNYPPIITESKS-NEATTGKQAILRCEASAVPAPDFEWYKD----DTRSRRINSAQGLEIRNTG 278

  Fly   341 NRHMLTIRHIQQEDFGNYSCVADNSLG 367
            :|.:|.:.::.:|.:|||:|||.|.||
 Frog   279 SRSVLMVANVTEEHYGNYTCVAANKLG 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klgNP_524454.2 IG_like 109..195 CDD:214653 26/91 (29%)
Ig strand B 118..122 CDD:409353 1/3 (33%)
Ig strand C 131..135 CDD:409353 1/3 (33%)
Ig strand E 160..164 CDD:409353 2/3 (67%)
Ig strand F 174..179 CDD:409353 2/4 (50%)
Ig strand G 188..191 CDD:409353 1/2 (50%)
Ig_3 196..270 CDD:464046 23/76 (30%)
Ig_3 287..364 CDD:464046 25/83 (30%)
FN3 392..486 CDD:238020
lsampXP_031751462.1 Ig 38..128 CDD:472250 27/115 (23%)
Ig strand B 49..53 CDD:409353 1/3 (33%)
Ig strand C 61..65 CDD:409353 1/4 (25%)
Ig strand E 94..98 CDD:409353 2/3 (67%)
Ig strand F 108..113 CDD:409353 2/4 (50%)
Ig strand G 121..124 CDD:409353 0/2 (0%)
Ig_3 131..206 CDD:464046 23/76 (30%)
Ig_3 223..302 CDD:464046 25/83 (30%)
Blue background indicates that the domain is not in the aligned region.

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