DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG4813 and rnf220.2

Sequence 1:NP_651088.1 Gene:CG4813 FlyBaseID:FBgn0039013 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_001107399.1 Gene:rnf220.2 XenbaseID:XB-GENE-5967022 Length:265 Species:Xenopus tropicalis

Alignment Length:25 Identity:8/26 (31%)
Similarity:17/26 (65%) Gaps:0/26 (0%)


  Fly    25 ICPTCDVKIKRSQVADHCQVEMERL 49
            |||.|.|.::..::.:|.:.|:::|
 Frog   222 ICPICQVLLRPGELQEHMEQELDKL 246

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG4813NP_651088.1 RNF220 22..281 CDD:292548 8/26 (31%)
zf-C3HC4_2 346..384 CDD:290634
rnf220.2NP_001107399.1 RNF220 216..>265 CDD:292548 8/26 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 D1583675at2759
OrthoFinder 1 1.000 FOG0004755
OrthoInspector 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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