DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cd and Pxdn

DIOPT Version :10

Sequence 1:NP_651081.1 Gene:cd / 42681 FlyBaseID:FBgn0263986 Length:830 Species:Drosophila melanogaster
Sequence 2:XP_006515268.1 Gene:Pxdn / 69675 MGIID:1916925 Length:1503 Species:Mus musculus


Alignment Length:830 Identity:264/830 - (31%)
Similarity:384/830 - (46%) Gaps:181/830 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 PSFFFVVNGSDSELAPNRPLP------DEPAAEWALQQAALGHHDGAQAVSAGIKALGDREILEE 138
            |.|..:.:....|:..|..||      .|||..|        :.||.|...:     |...|..|
Mouse   550 PVFASIPSDMTVEVGTNVQLPCSSQGEPEPAITW--------NKDGVQVTES-----GKFHISPE 601

  Fly   139 G-LQPNEVNTPSFRHYRSLSTN---------------PEARKLARRG-------YVENQATI--- 177
            | |..|:|.|.....|..::.|               |:   ::|.|       .||..||:   
Mouse   602 GFLTINDVGTADAGRYECVARNTIGYASVSMVLSVNVPD---VSRNGDPYVATSIVEAIATVDRA 663

  Fly   178 -----------------DIAKRFNYTKQP---GRSNIGWGPKIV--------------------- 201
                             |:...|.|.:.|   |::..|   :|.                     
Mouse   664 INSTRTHLFDSRPRSPNDLLALFRYPRDPYTVGQARAG---EIFERTLQLIQEHVQHGLMVDLNG 725

  Fly   202 -------LPDPTVLRL--------------ECD---FNARYRRSTGVCNNKQHPRTYGASMVPYR 242
                   |..|..|.|              .|.   |:.:||...|.|||.||| .:|||:..:.
Mouse   726 TSYHYNDLVSPQYLSLIANLSGCTAHRRVNNCSDMCFHQKYRTHDGTCNNLQHP-MWGASLTAFE 789

  Fly   243 RMVSPDYADGIAAPRVSHHGR------LPPARQVSLKIHRSSYET-DSNFTVMLAVFGQFMDHDI 300
            |::...|.:|...||..:..|      ||..|.||..:..:...| |..||.||..:|||:|||:
Mouse   790 RLLKAVYENGFNTPRGINSQRQYNGHVLPMPRLVSTTLIGTEVITPDEQFTHMLMQWGQFLDHDL 854

  Fly   301 TATSLTTSQ----EGESIDCCVAATREQHPECYPVDILPDDPYYKQYNISCMNFVRSAP-APTGR 360
            .:|.:..||    :|:  .|....:.:  |.|:.|.|.|:||..:. ...||.||||:| ..:|.
Mouse   855 DSTVVALSQARFSDGQ--HCSSVCSND--PPCFSVMIPPNDPRVRS-GARCMFFVRSSPVCGSGM 914

  Fly   361 FG-------PRMQLNQATAFIDASVVYGNLEQRQNQLRSFIN--GSLRM-FVTDDGRQLLPISSN 415
            ..       ||.|:||.|::||||.|||:.:.....:|...:  |.||. .|...|:.|||.::.
Mouse   915 TSLLMNSVYPREQINQLTSYIDASNVYGSTDHEARSIRDLASHRGLLRQGIVQRSGKPLLPFATG 979

  Fly   416 PADGCNRVQMTRLGKYCFESGDDRANENLLLTSMHLLWARHHNYLARQLQEQNPHWEDERLYQEA 480
            |...|.|.: ......||.:||.||||.|.|||||.||.|.||.:|.:|.:.||||:.:.:|.|.
Mouse   980 PPTECMRDE-NESPIPCFLAGDHRANEQLGLTSMHTLWFREHNRIAAELLKLNPHWDGDTVYHET 1043

  Fly   481 RKILGAQMAHITYNEFLPVLLG----KNISEAKGLLPAKHNLNAPDTYDPEVDPSIANCFAAAAF 541
            |||:||::.||||..:||.:||    |.:.|.:|             |||.|:..|.|.||.|||
Mouse  1044 RKIVGAEIQHITYRHWLPKILGEVGMKMLGEYRG-------------YDPSVNAGIFNAFATAAF 1095

  Fly   542 RFAHTLL-PGLFNISRD-NSTPEA-IELHKMLFNPFSLWAEHGID---HALMTAANTPVMQV-DR 599
            ||.|||: |.|:.:..: ...|:. :.|||..|:||.:..|.|||   ..|...|..  |:: .:
Mouse  1096 RFGHTLINPLLYRLDENFEPIPQGHVPLHKAFFSPFRIVNEGGIDPLLRGLFGVAGK--MRIPSQ 1158

  Fly   600 FFSLEVTQKLFEGTAEDRVPLCGLDLVSLNIQRGRDHGIPSYPVFRRHCRLPTVDTWEEMSQAID 664
            ..:.|:|::||     .......|||.::|||||||||||.|..:|.:|.|....|:|::...|.
Mouse  1159 LLNTELTERLF-----SMAHTVALDLAAINIQRGRDHGIPPYHDYRVYCNLSAAYTFEDLKNEIK 1218

  Fly   665 NATL-DSIRQIYESPQDVDVYTGALSEPPLDGAIFGPLLSCMVSDQFLRLKLGDSHWYERKMGPQ 728
            :..: :.::::|.|..::|::...:.|..:.|:..||.|.|::|.||.||:.||..|||   .|.
Mouse  1219 SPVIREKLQRLYGSTLNIDLFPALMVEDLVPGSRLGPTLMCLLSTQFRRLRDGDRLWYE---NPG 1280

  Fly   729 KFTKAQLAEIYKTSLAAIICRNSDGITRVREHVMQRLRDGGNPHVDCQDL 778
            .|:.|||.::.:||||.|:|.|||.||||::.|. |:.:..:.:..|:|:
Mouse  1281 VFSPAQLTQLKQTSLARILCDNSDNITRVQQDVF-RVAEFPHGYSSCEDI 1329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cdNP_651081.1 An_peroxidase 218..762 CDD:460804 217/577 (38%)
PxdnXP_006515268.1 leucine-rich repeat 94..112 CDD:275380
leucine-rich repeat 113..127 CDD:275378
LRR_8 160..219 CDD:404697
leucine-rich repeat 161..184 CDD:275378
leucine-rich repeat 185..208 CDD:275378
leucine-rich repeat 209..221 CDD:275378
LRRCT 217..268 CDD:214507
I-set 271..358 CDD:400151
Ig strand B 288..292 CDD:409353
Ig strand C 301..305 CDD:409353
Ig strand F 339..344 CDD:409353
Ig strand G 353..356 CDD:409353
I-set 367..454 CDD:400151
Ig strand B 384..388 CDD:409353
Ig strand C 397..401 CDD:409353
Ig strand E 420..424 CDD:409353
Ig strand F 434..439 CDD:409353
Ig strand G 447..450 CDD:409353
Ig3_Peroxidasin 471..544 CDD:143222
Ig strand B 475..479 CDD:143222
Ig strand C 488..492 CDD:143222
Ig strand E 510..514 CDD:143222
Ig strand F 524..529 CDD:143222
Ig strand G 538..541 CDD:143222
Ig4_Peroxidasin 567..635 CDD:143223 19/80 (24%)
Ig strand B 567..571 CDD:143223 1/3 (33%)
Ig strand C 580..584 CDD:143223 2/11 (18%)
Ig strand E 602..606 CDD:143223 2/3 (67%)
Ig strand F 616..621 CDD:143223 1/4 (25%)
Ig strand G 630..633 CDD:143223 0/2 (0%)
peroxidasin_like 889..1328 CDD:188658 176/464 (38%)
VWC 1439..1494 CDD:214564
Blue background indicates that the domain is not in the aligned region.

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