DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cd and Pxdn

DIOPT Version :9

Sequence 1:NP_651081.1 Gene:cd / 42681 FlyBaseID:FBgn0263986 Length:830 Species:Drosophila melanogaster
Sequence 2:XP_006515268.1 Gene:Pxdn / 69675 MGIID:1916925 Length:1503 Species:Mus musculus


Alignment Length:830 Identity:264/830 - (31%)
Similarity:384/830 - (46%) Gaps:181/830 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 PSFFFVVNGSDSELAPNRPLP------DEPAAEWALQQAALGHHDGAQAVSAGIKALGDREILEE 138
            |.|..:.:....|:..|..||      .|||..|        :.||.|...:     |...|..|
Mouse   550 PVFASIPSDMTVEVGTNVQLPCSSQGEPEPAITW--------NKDGVQVTES-----GKFHISPE 601

  Fly   139 G-LQPNEVNTPSFRHYRSLSTN---------------PEARKLARRG-------YVENQATI--- 177
            | |..|:|.|.....|..::.|               |:   ::|.|       .||..||:   
Mouse   602 GFLTINDVGTADAGRYECVARNTIGYASVSMVLSVNVPD---VSRNGDPYVATSIVEAIATVDRA 663

  Fly   178 -----------------DIAKRFNYTKQP---GRSNIGWGPKIV--------------------- 201
                             |:...|.|.:.|   |::..|   :|.                     
Mouse   664 INSTRTHLFDSRPRSPNDLLALFRYPRDPYTVGQARAG---EIFERTLQLIQEHVQHGLMVDLNG 725

  Fly   202 -------LPDPTVLRL--------------ECD---FNARYRRSTGVCNNKQHPRTYGASMVPYR 242
                   |..|..|.|              .|.   |:.:||...|.|||.||| .:|||:..:.
Mouse   726 TSYHYNDLVSPQYLSLIANLSGCTAHRRVNNCSDMCFHQKYRTHDGTCNNLQHP-MWGASLTAFE 789

  Fly   243 RMVSPDYADGIAAPRVSHHGR------LPPARQVSLKIHRSSYET-DSNFTVMLAVFGQFMDHDI 300
            |::...|.:|...||..:..|      ||..|.||..:..:...| |..||.||..:|||:|||:
Mouse   790 RLLKAVYENGFNTPRGINSQRQYNGHVLPMPRLVSTTLIGTEVITPDEQFTHMLMQWGQFLDHDL 854

  Fly   301 TATSLTTSQ----EGESIDCCVAATREQHPECYPVDILPDDPYYKQYNISCMNFVRSAP-APTGR 360
            .:|.:..||    :|:  .|....:.:  |.|:.|.|.|:||..:. ...||.||||:| ..:|.
Mouse   855 DSTVVALSQARFSDGQ--HCSSVCSND--PPCFSVMIPPNDPRVRS-GARCMFFVRSSPVCGSGM 914

  Fly   361 FG-------PRMQLNQATAFIDASVVYGNLEQRQNQLRSFIN--GSLRM-FVTDDGRQLLPISSN 415
            ..       ||.|:||.|::||||.|||:.:.....:|...:  |.||. .|...|:.|||.::.
Mouse   915 TSLLMNSVYPREQINQLTSYIDASNVYGSTDHEARSIRDLASHRGLLRQGIVQRSGKPLLPFATG 979

  Fly   416 PADGCNRVQMTRLGKYCFESGDDRANENLLLTSMHLLWARHHNYLARQLQEQNPHWEDERLYQEA 480
            |...|.|.: ......||.:||.||||.|.|||||.||.|.||.:|.:|.:.||||:.:.:|.|.
Mouse   980 PPTECMRDE-NESPIPCFLAGDHRANEQLGLTSMHTLWFREHNRIAAELLKLNPHWDGDTVYHET 1043

  Fly   481 RKILGAQMAHITYNEFLPVLLG----KNISEAKGLLPAKHNLNAPDTYDPEVDPSIANCFAAAAF 541
            |||:||::.||||..:||.:||    |.:.|.:|             |||.|:..|.|.||.|||
Mouse  1044 RKIVGAEIQHITYRHWLPKILGEVGMKMLGEYRG-------------YDPSVNAGIFNAFATAAF 1095

  Fly   542 RFAHTLL-PGLFNISRD-NSTPEA-IELHKMLFNPFSLWAEHGID---HALMTAANTPVMQV-DR 599
            ||.|||: |.|:.:..: ...|:. :.|||..|:||.:..|.|||   ..|...|..  |:: .:
Mouse  1096 RFGHTLINPLLYRLDENFEPIPQGHVPLHKAFFSPFRIVNEGGIDPLLRGLFGVAGK--MRIPSQ 1158

  Fly   600 FFSLEVTQKLFEGTAEDRVPLCGLDLVSLNIQRGRDHGIPSYPVFRRHCRLPTVDTWEEMSQAID 664
            ..:.|:|::||     .......|||.::|||||||||||.|..:|.:|.|....|:|::...|.
Mouse  1159 LLNTELTERLF-----SMAHTVALDLAAINIQRGRDHGIPPYHDYRVYCNLSAAYTFEDLKNEIK 1218

  Fly   665 NATL-DSIRQIYESPQDVDVYTGALSEPPLDGAIFGPLLSCMVSDQFLRLKLGDSHWYERKMGPQ 728
            :..: :.::::|.|..::|::...:.|..:.|:..||.|.|::|.||.||:.||..|||   .|.
Mouse  1219 SPVIREKLQRLYGSTLNIDLFPALMVEDLVPGSRLGPTLMCLLSTQFRRLRDGDRLWYE---NPG 1280

  Fly   729 KFTKAQLAEIYKTSLAAIICRNSDGITRVREHVMQRLRDGGNPHVDCQDL 778
            .|:.|||.::.:||||.|:|.|||.||||::.|. |:.:..:.:..|:|:
Mouse  1281 VFSPAQLTQLKQTSLARILCDNSDNITRVQQDVF-RVAEFPHGYSSCEDI 1329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cdNP_651081.1 An_peroxidase 218..755 CDD:281139 213/570 (37%)
peroxinectin_like 364..750 CDD:188655 154/400 (39%)
PxdnXP_006515268.1 leucine-rich repeat 94..112 CDD:275380
leucine-rich repeat 113..127 CDD:275378
LRR_8 115..171 CDD:338972
LRR_8 160..219 CDD:338972
leucine-rich repeat 161..184 CDD:275378
leucine-rich repeat 185..208 CDD:275378
leucine-rich repeat 209..221 CDD:275378
TPKR_C2 217..268 CDD:387596
I-set 271..358 CDD:369462
I-set 367..454 CDD:369462
Ig3_Peroxidasin 471..544 CDD:143222
Ig4_Peroxidasin 567..635 CDD:143223 19/80 (24%)
peroxidasin_like 889..1328 CDD:188658 176/464 (38%)
VWC 1439..1494 CDD:214564
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276568at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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