DRSC/TRiP Functional Genomics Resources

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Protein Alignment cd and ptgs2b

DIOPT Version :10

Sequence 1:NP_651081.1 Gene:cd / 42681 FlyBaseID:FBgn0263986 Length:830 Species:Drosophila melanogaster
Sequence 2:NP_001020675.1 Gene:ptgs2b / 559020 ZFINID:ZDB-GENE-041014-323 Length:606 Species:Danio rerio


Alignment Length:657 Identity:130/657 - (19%)
Similarity:219/657 - (33%) Gaps:184/657 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 PNEVNTPSFRHYRSLSTNPEARKLARRGYVENQAT-----IDIAKRFN----YTKQPGRSNIGWG 197
            ||.|:. ...|::||..........|.|.:....|     ||....||    |......||:.:.
Zfish    73 PNTVHY-ILTHFKSLWNIINNVSFLRNGIMRYVLTSRAHLIDSPPTFNADYGYKSWEAYSNLSYY 136

  Fly   198 PKIVLPDPTVLRLECDFNARYRRSTGVCNNKQHPRT-YGASMVPYRRMVSPDYADGIAAPRVSHH 261
            .:.:.|.|.    :|.      ...||...|:.|.. ..|..:..||...||             
Zfish   137 TRTLPPVPR----DCP------TPMGVAGKKELPDVKMLAEKLLLRRKFIPD------------- 178

  Fly   262 GRLPPARQVSLKIHRSSYETDSNFTVMLAVFGQFMDHDITATSLTTSQEGESIDCCVAATREQHP 326
                |.|.                .:|.|.|.|...|.                           
Zfish   179 ----PQRT----------------NLMFAFFAQHFTHQ--------------------------- 196

  Fly   327 ECYPVDILPDDPYYKQYNISCMNFVRSAPAPTGRFGPRMQLNQATAFIDASVVYGNLEQRQNQLR 391
                        ::|       :.::..||.|      ..||..   :|.:.:||....||::||
Zfish   197 ------------FFK-------SDMKKGPAFT------TALNHG---VDLAHIYGQNLDRQHKLR 233

  Fly   392 SFINGSLRMFVTDDGRQLLPISSNPADGCN---RVQMTRLGKYCFESGDDRANENLLLTSMHLLW 453
            .|.:|.||..:. ||....|..|......:   .|..:|.    |..|.:.......|.....:|
Zfish   234 LFKDGKLRYQIL-DGEVYPPTVSEVQVDMHYPPHVPESRR----FAVGHEAFGLVPGLMMYATIW 293

  Fly   454 ARHHNYLARQLQEQNPHWEDERLYQEARKILGAQMAHITYNEFLPVLLGKNISEAKGLLPAKHNL 518
            .|.||.:...|::::|.|:||||:|.:|.||..:...|...:::..|.|.....           
Zfish   294 LREHNRVCDILKQEHPDWDDERLFQTSRLILIGETIKIVIEDYVQHLSGYYFKL----------- 347

  Fly   519 NAPDTYDPEVDPSIANCFAAAAFRFA-------------HTLLPGLFNISRDNSTPEAIELHKML 570
                .:|||:   :.|    ..|::.             |.|:|..|:|.     .|.....:.|
Zfish   348 ----KFDPEL---LFN----ERFQYQNRISSEFNTLYHWHPLMPDDFHIQ-----DEVYNYQQFL 396

  Fly   571 FNPFSLWAEHGIDHALMTAANTPVMQVDRFFSLEVTQKLFEGTAEDRVPLCGLDLVSLNIQRGRD 635
            ||. |:..::|::..:.:            |:.::..::..|.   .|....|.:...:|:..|.
Zfish   397 FNT-SILTDYGVNSLVES------------FNKQIAGRVAGGR---NVAPAVLRVAIKSIENSRQ 445

  Fly   636 HGIPSYPVFRRHCRLPTVDTWEEMSQAIDNATLDSIRQIYESPQDVDVYTGALSEPPLDGAIFGP 700
            ....|...:|:...:....::|||:...:.|.  .:.::|.....|::|.|.|.|.|...||||.
Zfish   446 MRYQSINAYRKRFNMKPYRSFEEMTGEKEMAA--ELEEMYGDVDAVELYAGLLVEKPRSNAIFGE 508

  Fly   701 LLSCMVSDQFLRLKLGD-----SHWYERKMGPQKFTKAQLAEIYKTSLAAIICRNSDGITRVREH 760
            .:..|.:...|:..:|:     .:|.....|    .|.....:...||..::|.|.:|...:...
Zfish   509 TMVEMGAPYSLKGLMGNPICSPEYWKPSTFG----GKVGFEIVNSASLQNLVCNNVNGPCPMASF 569

  Fly   761 VMQRLRD 767
            .:..::|
Zfish   570 YVPNVKD 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cdNP_651081.1 An_peroxidase 218..762 CDD:460804 110/565 (19%)
ptgs2bNP_001020675.1 EGF_CA 21..57 CDD:238011
prostaglandin_endoperoxide_synthase 77..565 CDD:188648 126/640 (20%)
Blue background indicates that the domain is not in the aligned region.

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