DRSC/TRiP Functional Genomics Resources

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Protein Alignment Efa6 and SYT1

DIOPT Version :10

Sequence 1:NP_001163691.2 Gene:Efa6 / 42665 FlyBaseID:FBgn0051158 Length:1601 Species:Drosophila melanogaster
Sequence 2:NP_015420.1 Gene:SYT1 / 856210 SGDID:S000006299 Length:1226 Species:Saccharomyces cerevisiae


Alignment Length:725 Identity:144/725 - (19%)
Similarity:270/725 - (37%) Gaps:201/725 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   752 NRSSSSSSNSSDNNNCSSNTGEPATSETATATATIITATSTRTMNCSSKLNYILCKKASDRDRIV 816
            :.|:..:.|....:|.|:...:...||:..:....:......|.|...||:...|:         
Yeast    16 SHSNDKNGNKKGGSNVSTGIDKLRESESYRSPFLQLAEIQEHTNNDDDKLDVKECE--------- 71

  Fly   817 WTYNAPLQPH-QLAALQRQQQQQEQQFQQQQQQ-------LHQQHLQQQQQLQQQ-HQQQQQQQQ 872
                 |.:.| :|:.::|:..:.:..|:...::       |..|||:..|..::. .:.:.....
Yeast    72 -----PTKKHSKLSRIRRKMGRLDLNFRSANEKGSEDDEILVAQHLRNGQDPEEMPFKSENNIDS 131

  Fly   873 QQQQQQLYGQQ-SHSNSHSSSISSSPQHSAV------------------------------GS-- 904
            .::..:..|:: :.::|.|.::..:.:|:..                              |.  
Yeast   132 IEKVPKPDGERVTLTSSGSDNVKRNSKHAPFIPVKPALEKFPSSNRLSRDYRKSQEPTLFNGDRL 196

  Fly   905 -PASPT----SVSSSVMSSSG-------SKGALGLGSSSNG-----------PMAAV-------Q 939
             |..||    |.||||.||:.       ||.|:...|||:.           |:.|.       |
Yeast   197 VPTLPTVSRISTSSSVGSSTAASRYFNPSKRAVVASSSSSSSSIKFNSLHAIPLDATPQIELAKQ 261

  Fly   940 QQQLREREQGGQVAQPPSGIPGLLSCPGGGCGNNGGGGGIGGGGNNDQSVSEAISNISSPDYQDD 1004
            |.::.:|..|.:.::.......:..       ||        ...|...:|.: |.|.:.|.::.
Yeast   262 QDEISKRRFGRRRSRTVDVFDYINK-------NN--------TAKNKPPLSPS-SFIRTIDEKNT 310

  Fly  1005 DNLLSSRDILG--GMVLSDPSDSDSTILVSDA----AAHQRQQLKQQLRAQQQQ--QRERERDRD 1061
            ::|:  :|.:|  |.:|.|    |:.|:.:|.    |:|...|:..:.|:|...  |.:..:.:.
Yeast   311 NSLM--QDPMGSRGPLLPD----DANIISNDTDGAEASHPDHQVLSRSRSQSTSFVQGKGGKRKS 369

  Fly  1062 RDREQSEHKVVIQVRGLDSNSSGGNGTNGRSEEDVVTLTDEPLGTMTVGMRDASPPVSDDGSDVE 1126
            .:.|...:|:     ||...|...:..|.:|..:         .|:|...|.:|..|:...|.|.
Yeast   370 IEDEGYHNKL-----GLPHGSGPTSVYNNKSNAN---------STITGMSRRSSSIVNALSSFVN 420

  Fly  1127 SLHSYHYSPKAVDMPSAIRLAKRLH-SLDGFKKSDVSRHLSKNNDFSRAVA-------------- 1176
            ...|...|.:...:....:|.::|. ||:...............||...:|              
Yeast   421 LRSSSLSSSRQQHLQQQQQLQQKLDVSLEDLPPVPAPEFSDSCKDFLIKLAPYGKFIGIILTEKD 485

  Fly  1177 DEYLKH---------FTFEKKSLDQALREFLQQFSLSGETQERERVLVHFS------------KR 1220
            ||:.|:         |.|:...||.|||:.|....|..|||:.:|:::.||            |:
Yeast   486 DEFKKNCLNYLLTNCFEFKNDPLDIALRKLLMFLELPKETQQIDRLIMAFSFAYYKAQKSYSKKK 550

  Fly  1221 FLDCNPGTFNSQDAVHTLTCAIMLLNTDLHGQNINRKMSCAEFVDNLADLND----GENFPKDVL 1281
            .::|   .:::.|.|:.:..::::|:||....|...||:..:|||.:.  ||    |...|..||
Yeast   551 GIEC---PWSNADQVYFIAFSLLMLHTDYFNPNNKSKMTKHDFVDLVH--NDKYSGGNEIPMAVL 610

  Fly  1282 KSLYQAIKTK-----------PL---EWALDEEAGDLQQQRANNSALGNVGLNPFLDPPELATAV 1332
            ...|:.:..|           |:   :..||::|.|      .|.|: .:..|....|.::    
Yeast   611 TYFYENVTAKESPKFNYFLMSPMALDDSILDKDAFD------TNFAI-TLSSNSMYSPIDM---- 664

  Fly  1333 EYKKGYVMRK 1342
             .|:|.::.|
Yeast   665 -IKRGSIIPK 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Efa6NP_001163691.2 PDZ_canonical 6..85 CDD:467153
PHA03269 225..>344 CDD:165527
Sec7 1124..1293 CDD:238100 49/219 (22%)
PH_EFA6 1330..1452 CDD:270107 3/13 (23%)
SYT1NP_015420.1 Sec7 443..622 CDD:214569 45/183 (25%)
Blue background indicates that the domain is not in the aligned region.

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