DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Efa6 and psda

DIOPT Version :10

Sequence 1:NP_001163691.2 Gene:Efa6 / 42665 FlyBaseID:FBgn0051158 Length:1601 Species:Drosophila melanogaster
Sequence 2:XP_009305653.1 Gene:psda / 570918 ZFINID:ZDB-GENE-090313-44 Length:1611 Species:Danio rerio


Alignment Length:1588 Identity:412/1588 - (25%)
Similarity:634/1588 - (39%) Gaps:445/1588 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 NSSPLLASGSTTTTTTATHTHSHSRNSS-----------ASSTKIKVVETSITTSTTNVVGLTSP 213
            :.||::.|.|.|..|.|| ...|.||||           ..|...|....:|:.||.|.      
Zfish   308 SGSPVIPSSSRTLPTKAT-IMDHERNSSFYRLPRSPATDQLSHHAKQAYFTISNSTVNT------ 365

  Fly   214 TGSVGGGVGGEATSPTFRPSRIPQALTKCAVPKPVPVLHSPQNKRPRPSQIPTKAANGNGNGHTA 278
                     .|.::...:.||:...|..|   ||..:.|.      .|::|.|::.:.....|:.
Zfish   366 ---------QEISNQRVQGSRLRPNLPSC---KPTAIQHE------LPAKIVTQSPSNQQISHSM 412

  Fly   279 HLPPQSLQHSNSYSGSPVTR-QRFADREPEREPEPNSAPPQPAKAPRFEAYMMTGDLILNLSRTP 342
            ...|:.....|.:.|:..|: ::..::..|:.....:..|..|:....||..::  :::...|||
Zfish   413 SDSPRQSHRVNFHLGNSKTKAEKVVNQLSEKRSISPATSPDTARKLAEEATKLS--VLMEARRTP 475

  Fly   343 QTSNPLPAQAKKIDSLRDSPSRLVNPRINGALAPRASGESSPTSSSSVDSPTNTSSDSVKREAKL 407
               :|.|:....:.|  |||.|               |.|.....|...|.:|.:..:.:...|.
Zfish   476 ---SPTPSSTDTVRS--DSPQR---------------GHSREPQDSEAQSHSNCNLPAHEHNRKN 520

  Fly   408 LQKQQQQQQQTYQQQQQRDSINNS-------YNRKDSLTNDTLLMCEELEPDEEGEYVLEEDNKQ 465
            .|...:...|.:|......:|.::       .||.|..::..:     .:|..:...::.:|: .
Zfish   521 FQTSVKTGYQFFQSTPLLSNIGSTSPAVPARLNRSDVKSSSPI-----RDPQIDRTQLVGKDS-P 579

  Fly   466 QRQRQQQQRYRQQQNQQRYEYYQNEDELEEQEEVEEEREEDQTHYDITNIETYQSGVGRGDDDDS 530
            ...|....:|.:..:...|                    :.|.|      :|.:   |..|..|.
Zfish   580 TLHRHLPTQYTRDNHTPTY--------------------DGQLH------DTLR---GHKDSPDI 615

  Fly   531 DRQCLVDDDDDDDAYDDEENDAGDEDYSTNSLGSGSAKQRLRALKQRTATRQQQRNRDAVDCAGR 595
            .|:.....:.|..|....:...|.|:..|            |..|.......|:||         
Zfish   616 IRRSFTRPNTDTSATWTSQEKHGLEECFT------------RDKKSLMEVNNQKRN--------- 659

  Fly   596 SGSGSSSTTVKSEAGGLGLDETSFSVPTSPISLSTPLIDKETANSVPTS---------PEPSSLV 651
                                  |.:.|.||        |.....|||.|         .|.|...
Zfish   660 ----------------------SLNTPGSP--------DNHCGVSVPHSEIKGHNRAKKEWSGTA 694

  Fly   652 PESSSGAGAGAVVVRRH-NGHVVRKCDAAGFRTS-KSEDHLQQIQREGIAAVIPIDIDEDVNSSL 714
            .:||||.....|....| ..|:..:..:   ||| ||.|                        |.
Zfish   695 SQSSSGVKGSLVESTLHEKKHISSETSS---RTSQKSSD------------------------SG 732

  Fly   715 NTLLDTRQDSEDSQSMATVIVNNSSLA--------SNNNEGEQTDNRSSSSSSNSSDNNNCSSNT 771
            ||.:    .||::..:....:::..:|        .:::|.:||.:.|:.|||      .|||.:
Zfish   733 NTAI----QSENATCLQRPSLHSQKIARAKWEFLFGSHSEDQQTKDSSTPSSS------GCSSES 787

  Fly   772 GEP--------------------------ATSETATATATIIT-----ATSTRTMNCSSKLNY-- 803
            ..|                          :..:.......:|:     .||.:|......:.|  
Zfish   788 PTPIPPLSTHLRPVTTHSRHYKSIGSSKSSCQDVQQVEVELISHHPTVGTSNKTGIIRRTVKYSE 852

  Fly   804 -------ILCKKASDRDRIVWTYNAPLQPHQLAALQRQQQQQEQQFQQQQQQLHQQ--------- 852
                   :.|.:.:|.|.::           ||    :|::.:..|...:..|...         
Zfish   853 TDIDAVPLRCYRETDLDEVM-----------LA----EQEEVDSAFGSNRSVLGTSGTTSSSPLD 902

  Fly   853 -----HLQQQQQLQQQH-----QQQQQQQQQQQQQQLYGQQSHSNSHSSSISSSP-QHSAVGSPA 906
                 |...:::||.:.     ..:.|..:::|.....|.:..|......:...| .|:.:.||.
Zfish   903 GVLCPHTDGEEELQDEEVASWASVRMQGDKKRQNATPEGDEVFSRLLRGPLDYQPDSHTDLKSPI 967

  Fly   907 SPTS---VSS-----------SVMSSSGSKGA--LGLGS---SSNGPMAAVQQQQLREREQGGQV 952
            |.||   |||           |:|.|..:||.  ..|.|   :.:||............|...|:
Zfish   968 SVTSPCRVSSDCLDTFSRHFESIMESHRAKGTSYSSLDSEDITPSGPPIFTFDFPTLTPEIQSQI 1032

  Fly   953 AQPPSGIPGL----LSCPGGGCGNNGGGGGIGGGGNNDQSVSEAISNISSPD-YQDDDNLLSSRD 1012
            .:....|..|    |:||                  ...:||..|  ::|.| :::|.:.:...|
Zfish  1033 CESAKQITELNFASLTCP------------------EPPTVSHLI--VASQDLHREDRSSVCEED 1077

  Fly  1013 ILGGMVLS---------DPSDSDSTILVSDAAAHQRQQLKQQLRAQQQQQRERERDRDRDREQSE 1068
               |:..:         ..||||:|                          :|||. .|...:|:
Zfish  1078 ---GLFCTGSHSEQTHRPDSDSDAT--------------------------KRERP-SRPVSESD 1112

  Fly  1069 HKVVIQVRGLDSNSSGGNGTNGRSEEDVVTLTDEPLGTMTVGMRDASPPVSDDGSDVESLHSYHY 1133
            .:|..:: .|.|..:..||..                                            
Zfish  1113 PEVAERL-ALGSTETLANGNK-------------------------------------------- 1132

  Fly  1134 SPKAVDMPSAIRLAKRLHSLDGFKKSDVSRHLSKNNDFSRAVADEYLKHFTFEKKSLDQALREFL 1198
                .|:.:|.||||||::|||||||||:|||||||:||..||:|||.||.|....:|||||.||
Zfish  1133 ----ADLQAAKRLAKRLYTLDGFKKSDVARHLSKNNEFSHMVAEEYLSHFNFSGMMVDQALRVFL 1193

  Fly  1199 QQFSLSGETQERERVLVHFSKRFLDCNPGTFNSQDAVHTLTCAIMLLNTDLHGQNINRKMSCAEF 1263
            ::|:|.||||||||||.|||||:|.|||.|...:|:|||||||:|||||||||.|:.::|||.:|
Zfish  1194 KEFALMGETQERERVLSHFSKRYLQCNPKTIPYEDSVHTLTCALMLLNTDLHGHNVGKRMSCMQF 1258

  Fly  1264 VDNLADLNDGENFPKDVLKSLYQAIKTKPLEWALDEEAGDLQQQRA-----NNSALGNV-----G 1318
            :.||..||||::||||:||:||.:||.:.|:|.:|||  :|::..:     .:||...:     |
Zfish  1259 IGNLQGLNDGQDFPKDLLKALYNSIKNEKLQWTIDEE--ELRKSFSEMDGRKDSASHTMKRISSG 1321

  Fly  1319 LNPFLDPPELATAVEYKKGYVMRKCCYDSSFKKTPFGKRSWKMFYCTLRDLVLYLHKDEHGFRKS 1383
            .|..:...:.::|..||.|:::||...|...||||.|||.||.||..|:.|:|||.|||:...|.
Zfish  1322 GNSLISVAQQSSAQVYKNGFLVRKVHADPDGKKTPRGKRGWKTFYAILKGLILYLQKDEYRPDKQ 1386

  Fly  1384 QMSDNLHNAIRIHHALATKANDYTKKQHVFRLQTADQAEYLFQTSDSKELQSWVETINYVCAAIS 1448
            ...::|.||:.|||:||.:|.||:|:.:||.|:|||...:|||..:::::|||:..||.|.|..|
Zfish  1387 LSDEDLKNAVSIHHSLAMRAADYSKRPNVFYLRTADWRVFLFQAPNAEQMQSWITRINTVAAMFS 1451

  Fly  1449 APPLEGGVGSQKRFQRPLLPSKQSKLMLKEQLDSHEVQLAQLDQELNEHKKGP--IPSKGLALQN 1511
            |||....:||||:|.|||||...:||..:|||.|||.:...:..||.|.:..|  ..:|....:.
Zfish  1452 APPFPAAIGSQKKFSRPLLPGSNTKLSQEEQLKSHETRFRTVSAELQELRSTPQDRKTKSRDQEE 1516

  Fly  1512 YKEKESYLQYELRRYRTYVSILSAKMLADQQQLELQAQQPSPASHE----EEADTFPVGTTACTP 1572
            ||::|.||.:|..||.||..:|..|:...:..|         |:.|    |::.   :..|..:|
Zfish  1517 YKQREEYLDFEKTRYGTYTMLLRTKIRMGETDL---------AAFEGRLFEDSG---LQRTHSSP 1569

  Fly  1573 PTPQSINQKDQQKEQQQQQPTNRKEKKK 1600
            ..||.|:.....||..:....:.:..|:
Zfish  1570 TLPQDISHASSTKETSRSSSGSSRRTKR 1597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Efa6NP_001163691.2 PDZ_canonical 6..85 CDD:467153
PHA03269 225..>344 CDD:165527 23/119 (19%)
Sec7 1124..1293 CDD:238100 101/168 (60%)
PH_EFA6 1330..1452 CDD:270107 58/121 (48%)
psdaXP_009305653.1 Sec7 1136..1288 CDD:238100 100/151 (66%)
PH_EFA6 1332..1456 CDD:270107 59/123 (48%)
Blue background indicates that the domain is not in the aligned region.

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