DRSC/TRiP Functional Genomics Resources

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Protein Alignment btn and hoxa6

DIOPT Version :10

Sequence 1:NP_732768.1 Gene:btn / 42664 FlyBaseID:FBgn0014949 Length:158 Species:Drosophila melanogaster
Sequence 2:XP_002933441.2 Gene:hoxa6 / 100485428 XenbaseID:XB-GENE-481964 Length:237 Species:Xenopus tropicalis


Alignment Length:127 Identity:45/127 - (35%)
Similarity:67/127 - (52%) Gaps:21/127 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 SYVYDHSA-SSSYADYNKLETNWCNEANDQWLQNEAPTGQELPS------QRSKLRAISS----- 85
            ||...|.. |..|..::..:..:.:.:....:.:|.||.::..|      ||     ::|     
 Frog    91 SYGTKHRGDSGEYLHFSADQQQYKSASAQGKMLHEEPTDRKYSSPVYPWMQR-----VNSCTGPV 150

  Fly    86 ----NRKERTAFSKTQLKQLEAEFCYSNYLTRLRRYEIAVALELTERQVKVWFQNRRMKCKR 143
                .|:.|..:::.|..:||.||.::.||||.||.|||.||.|||||:|:||||||||.|:
 Frog   151 YGAHGRRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKK 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btnNP_732768.1 Homeodomain 87..143 CDD:459649 32/55 (58%)
hoxa6XP_002933441.2 Homeodomain 156..212 CDD:459649 32/55 (58%)

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