DRSC/TRiP Functional Genomics Resources

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Protein Alignment btn and alx4a

DIOPT Version :10

Sequence 1:NP_732768.1 Gene:btn / 42664 FlyBaseID:FBgn0014949 Length:158 Species:Drosophila melanogaster
Sequence 2:XP_001340966.1 Gene:alx4a / 100006399 ZFINID:ZDB-GENE-070712-3 Length:368 Species:Danio rerio


Alignment Length:150 Identity:43/150 - (28%)
Similarity:67/150 - (44%) Gaps:23/150 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 CY-EDITKSWLNQTEGYTDCSYVYDHSASSSYADYNKLETNWCNEANDQWLQNEAPTGQELPSQR 77
            || :|.|        |.||.....:...:.....|..::        |..:::......||.|..
Zfish   115 CYGKDST--------GLTDSELPQNSDPAGMDGSYLSVK--------DSGVKSPQQATSELASPL 163

  Fly    78 SKLRAISS---NRKERTAFSKTQLKQLEAEFCYSNYLTRLRRYEIAVALELTERQVKVWFQNRRM 139
            .|....|:   .|:.||.|:..||::||..|..::|.....|.::|:..:|||.:|:|||||||.
Zfish   164 DKTEGESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRA 228

  Fly   140 KC-KRIKLEEQQGSSAKTPF 158
            |. ||.:..:.|  ..:|.|
Zfish   229 KWRKRERFGQMQ--QVRTHF 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
btnNP_732768.1 Homeodomain 87..143 CDD:459649 24/56 (43%)
alx4aXP_001340966.1 Homeodomain 176..232 CDD:459649 24/55 (44%)
OAR 344..362 CDD:461067
Blue background indicates that the domain is not in the aligned region.

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