DRSC/TRiP Functional Genomics Resources

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Protein Alignment tHMG1 and HMO1

DIOPT Version :10

Sequence 1:NP_651055.1 Gene:tHMG1 / 42650 FlyBaseID:FBgn0038978 Length:126 Species:Drosophila melanogaster
Sequence 2:NP_010459.1 Gene:HMO1 / 851754 SGDID:S000002581 Length:246 Species:Saccharomyces cerevisiae


Alignment Length:73 Identity:19/73 - (26%)
Similarity:39/73 - (53%) Gaps:7/73 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PKKPMSAFMLWMNSTGRKHI-----KAEHPDFSVQEVSVKGGEMWRAMADEDKIVWQESATTAMA 67
            ||||::.|..: ::..|:.:     ||..|..|..|::.:..:.|:.::|.:|..|:::....:.
Yeast   106 PKKPLTVFFAY-SAYVRQELREDRQKAGLPPLSSTEITQEISKKWKELSDNEKEKWKQAYNVELE 169

  Fly    68 EY-KEKLK 74
            .| :||.|
Yeast   170 NYQREKSK 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tHMG1NP_651055.1 HMG_box 8..76 CDD:459837 19/73 (26%)
HMO1NP_010459.1 NHP6B 36..246 CDD:227935 19/73 (26%)

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