DRSC/TRiP Functional Genomics Resources

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Protein Alignment tHMG1 and SOX14

DIOPT Version :10

Sequence 1:NP_651055.1 Gene:tHMG1 / 42650 FlyBaseID:FBgn0038978 Length:126 Species:Drosophila melanogaster
Sequence 2:NP_004180.1 Gene:SOX14 / 8403 HGNCID:11193 Length:240 Species:Homo sapiens


Alignment Length:85 Identity:23/85 - (27%)
Similarity:42/85 - (49%) Gaps:10/85 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KKPMSAFMLWMNSTGRKHIKAEHPDFSVQEVSVKGGEMWRAMADEDKIVWQESATTAMAE----- 68
            |:||:|||:|.....|| :..|:|.....|:|.:.|..|:.:::.:|..:.:.|....|:     
Human     9 KRPMNAFMVWSRGQRRK-MAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMKEH 72

  Fly    69 ----YKEKLKQWNFPKEHRF 84
                |:.:.|..|..|:.|:
Human    73 PDYKYRPRRKPKNLLKKDRY 92

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tHMG1NP_651055.1 HMG_box 8..76 CDD:459837 20/75 (27%)
SOX14NP_004180.1 HMG-box_SoxB 6..85 CDD:438790 20/76 (26%)
SOXp 77..>118 CDD:463537 5/16 (31%)

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