Protein Alignment tHMG1 and HMGB1

DIOPT Version :10

• Sequence 1: NP_651055.1
• Gene: tHMG1 / 42650
• FlyBaseID: FBgn0038978
• Length: 126
• Species: Drosophila melanogaster
• Sequence 2: NP_974413.1
• Gene: HMGB1 / 824351
• AraportID: AT3G51880
• Length: 185
• Species: Arabidopsis thaliana
• Alignment Length: 72
• Identity: 22/72 - (30%)
• Similarity: 42/72 - (58%)
• Gaps: 2/72 - (2%)

  Fly     7 RPKKPMSAFMLWMNSTGRKHIKAEHPDF-SVQEVSVKGGEMWRAMADEDKIVWQESATTAMAEYK 70
            :||:..|||.:::... |...|.|:|:. :|..|...||:.|::|:..:|..::|.|....|||:
plant    52 KPKRAPSAFFVFLEDF-RVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYE 115

  Fly    71 EKLKQWN 77
            :::..:|
plant   116 KQMDAYN 122

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tHMG1	NP_651055.1	HMG_box	8..76	CDD:459837	21/68 (31%)
HMGB1	NP_974413.1	PRK05901	1..>171	CDD:235640	22/72 (31%)
		HMG-box_AtHMGB1-like	54..114	CDD:438821	18/60 (30%)