DRSC/TRiP Functional Genomics Resources

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Protein Alignment tHMG1 and Hmg-2

DIOPT Version :10

Sequence 1:NP_651055.1 Gene:tHMG1 / 42650 FlyBaseID:FBgn0038978 Length:126 Species:Drosophila melanogaster
Sequence 2:XP_001689081.2 Gene:Hmg-2 / 5667224 VectorBaseID:AGAMI1_010009 Length:324 Species:Anopheles gambiae


Alignment Length:74 Identity:18/74 - (24%)
Similarity:40/74 - (54%) Gaps:1/74 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PKKPMSAFMLWMNSTGRKHIKAEHPDFSVQEVSVKGGEMWRAMADEDKIVWQESATTAMAEYKEK 72
            ||.|::.::.:||. .|:.::.:||:.:..||:....|.|..:::|.|..:.|:|......|.::
Mosquito    74 PKHPLTGYVRYMNE-HREGVRQKHPNLTPIEVTKIMAEEWSKLSEERKKPYLEAAEVDKERYNKE 137

  Fly    73 LKQWNFPKE 81
            :.::....|
Mosquito   138 ISEYKLNNE 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tHMG1NP_651055.1 HMG_box 8..76 CDD:459837 17/67 (25%)
Hmg-2XP_001689081.2 None

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