Protein Alignment tHMG1 and HmgZ

DIOPT Version :10

• Sequence 1: NP_651055.1
• Gene: tHMG1 / 42650
• FlyBaseID: FBgn0038978
• Length: 126
• Species: Drosophila melanogaster
• Sequence 2: NP_726106.1
• Gene: HmgZ / 37480
• FlyBaseID: FBgn0010228
• Length: 111
• Species: Drosophila melanogaster
• Alignment Length: 72
• Identity: 29/72 - (40%)
• Similarity: 49/72 - (68%)
• Gaps: 3/72 - (4%)

  Fly     5 GARPKKPMSAFMLWMNSTGRKHIKAEHPDFSVQEVSVKGGEMWRAMADEDKIVWQESATTAMAEY 69
            |.|||:|:||:|||:|.| |:.||.::|...|.:::.:|||:||.:  :||..|::.|.....||
  Fly     3 GDRPKRPLSAYMLWLNET-REQIKKDNPGSKVTDIAKRGGELWRGL--KDKTEWEQKAIKMKEEY 64

  Fly    70 KEKLKQW 76
            .:.:|::
  Fly    65 NKAVKEY 71

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
tHMG1	NP_651055.1	HMG_box	8..76	CDD:459837	27/67 (40%)
HmgZ	NP_726106.1	HMG-box_SSRP1-like	8..72	CDD:438810	25/67 (37%)