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Protein Alignment tHMG1 and Tox
DIOPT Version :10
| Sequence 1: | NP_651055.1 |
Gene: | tHMG1 / 42650 |
FlyBaseID: | FBgn0038978 |
Length: | 126 |
Species: | Drosophila melanogaster |
| Sequence 2: | XP_063143968.1 |
Gene: | Tox / 362481 |
RGDID: | 1310455 |
Length: | 527 |
Species: | Rattus norvegicus |
| Alignment Length: | 124 |
Identity: | 33/124 - (26%) |
| Similarity: | 56/124 - (45%) |
Gaps: | 28/124 - (22%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 2 SDCGARPK--------------KPMSAFMLWMNSTGRKHIKAEHPDFSVQEVSVKGGEMWRAMAD 52
||.|.:|| ||:||:.|:...| :..||.::|:.:..|||.....||..:.:
Rat 243 SDMGKKPKTPKKKKKKDPNEPQKPVSAYALFFRDT-QAAIKGQNPNATFGEVSKIVASMWDGLGE 306
Fly 53 EDKIVWQESATTAMAEYKEKL---------KQWNFPKEHRFSDTQCICSSNTNQCPTLF 102
|.|.|:::....|..||.::| |.:|.|.:.:.|....:.:|. |::|
Rat 307 EQKQVYKKKTEAAKKEYLKQLAAYRASLVSKSYNDPVDVKTSQPPQLVNSK----PSVF 361
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| tHMG1 | NP_651055.1 |
HMG_box |
8..76 |
CDD:459837 |
24/90 (27%) |
| Tox | XP_063143968.1 |
None |
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